Thermococcus indicus: FH039_11155
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Entry
FH039_11155 CDS
T07099
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tic
Thermococcus indicus
Pathway
tic03420
Nucleotide excision repair
tic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FH039_11155
03430 Mismatch repair
FH039_11155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tic03400
]
FH039_11155
Enzymes [BR:
tic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH039_11155
DNA repair and recombination proteins [BR:
tic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FH039_11155
MMR (mismatch excision repair)
Other MMR factors
FH039_11155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
DO-GTPase2
nSTAND3
PhoH
AAA_18
COE1_DBD
AAA_5
AAA_24
AAA_28
MHC_II_beta
Motif
Other DBs
NCBI-ProteinID:
QDA32051
UniProt:
A0A4Y5SPL4
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All DBs
Position
2054727..2056382
Genome browser
AA seq
551 aa
AA seq
DB search
MNAQITILGPPGTGKTSALINLYKYFIGDASTDVTSFVQRYNLNKLIMRRDYTSDEVLFL
TFTTSAVRVLKERGIYNAYTLHSYITRVLMRNKLLTPSGFMKEPFIAAMMEMNYGYDFRD
RFSSHPSNVAEIRYNYYFNVYYDKDSEEILEIVKQREKSAVYQRIRDYVEWREKKGIFDY
VSVLRYFLTTTPATLAPEKEGSEPRVMIMDEAQDFSPLQWAVVRRLRRIGLLDYVVAAGD
PNQSIYSFQGADPSEFENFMASGTVVVLKRSYRLPKHVYNKAEMLTRWLRTHFEYEPREE
LGKAITEYLKRSNLLKMDRTTGDKVIQILESVMNENKTVFVLTRTNKQARELEKYIIEAG
YRVSRIKNDDSLYDLLEEVIAFEEKRNVGLRLFFAVTSLNEEGIRLRSLFKTPTEAIMKV
EECLSGREHLNDEESEAGGCSDDVLSLARFIENHYLDVLDHEEKRVLDGLRRRRNGRVIH
VDTMHAAKGEEADVVIVIDFVNRKIEKEIQRDENALKEEVRVLYVAMTRAREKLYVLTSK
SKRSVLGYVRF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccagataaccattctgggacctccagggacaggaaagacctctgctctcatc
aatctctacaagtactttataggagacgcttccacggatgttacaagcttcgtgcaacga
tacaacctcaataagctcatcatgagaagggattacacgagcgacgaggtgctctttctc
acctttacaacttctgcagtcagggttctgaaagagagaggcatttacaacgcgtacact
ctgcatagttatatcacaagggttctcatgcggaataagctactcacgccgtcgggattc
atgaaagagccgtttattgccgcaatgatggaaatgaattacggctatgacttcagggac
cggttcagttcacatccatcgaacgttgccgagataaggtacaactactatttcaacgtc
tattatgacaaagacagcgaggaaattcttgaaatcgtgaaacaacgggagaaaagtgcc
gtgtaccagagaataagggattatgtggaatggagagagaaaaagggcatttttgactat
gtatcagttctcaggtacttcctcacaacaactcccgctacactcgctccggagaaggag
ggcagtgagcccagggtcatgataatggacgaagctcaggacttcagtccccttcagtgg
gcagttgtgagaaggttgagacgcatcggcctcctcgactatgtcgttgcagctggagac
ccgaaccagtcgatatattcattccagggggctgatccttccgagtttgagaatttcatg
gcgtctggtacggttgttgtattgaagagaagttatagactgcccaagcacgtgtacaac
aaggcggagatgcttacacgctggctcaggacccacttcgagtatgagccacgtgaggaa
cttggcaaggctatcacggagtacttgaaaaggtccaatctactcaaaatggacaggaca
acaggcgataaagtgattcagattcttgagagcgttatgaacgaaaataaaaccgttttc
gtccttacgaggacaaacaagcaggcaagagagctcgaaaagtacatcattgaggcggga
tacagagtttcgaggataaagaatgatgacagtctctatgacctccttgaggaagtcatc
gccttcgaggagaaaaggaacgtcggactgaggctgttcttcgctgtaacatctctgaac
gaggaaggaattcggcttcggtccctgttcaagacgcccacagaagccataatgaaggtc
gaggaatgcctcagtgggagagagcacctcaatgatgaagagagcgaagcggggggatgc
tctgatgacgttctatcccttgcaaggttcattgagaaccattaccttgatgttcttgat
catgaagagaagcgtgttttggatgggctcagaaggaggaggaatggaagggtaatccac
gtggacacgatgcacgctgcaaagggtgaggaggctgatgttgtcattgtcattgatttc
gtgaatcgcaagattgaaaaggagattcagagggatgagaacgctttgaaggaggaggta
agggttctttacgttgcgatgactcgtgcgagagagaagctctatgttctcacaagcaag
tcaaagaggtctgtgttggggtatgtgaggttttga
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