Thermodesulfatator indicus: Thein_0879
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Entry
Thein_0879 CDS
T01546
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tid
Thermodesulfatator indicus
Pathway
tid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thein_0879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tid03400
]
Thein_0879
DNA repair and recombination proteins [BR:
tid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thein_0879
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thein_0879
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_C
RecO_N
LIM
DUF2175
Motif
Other DBs
NCBI-ProteinID:
AEH44756
UniProt:
F8ACW4
LinkDB
All DBs
Position
complement(920646..921425)
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AA seq
259 aa
AA seq
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MNVVVQAIILSSQTLGEKDVRLELLSAERGRLAAVAKGGRKSLKRFVNTLEPFSLIQAHL
RGGKVNLPPFLDQADLLNPFENLRFEPLTFAKAAYLSELVECFFKVGTGQAFFSFFEESL
YVLNKGLDFWPLLKISFELSLLKASGFFPYLGESCLRCEKPLKRDVFFSFTEGGVVCENC
AFEEDFALDLKLLAFLNHIAHVSPMRLRIIKPGAENLKRAERLIENFVLRVLNQEINSLR
VLKEMFNNKSLANSHGGRP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgtcgttgttcaggccatcattttaagttctcaaacgctaggagagaaagatgtc
cggctggagttactttcagcagaacgcgggcgtttggccgctgtagctaaaggagggcgt
aaaagtctcaaacgttttgttaacacccttgagcccttttctcttattcaggcccatttg
cgcggtggcaaggtaaatttgccaccatttctagatcaggccgatttgctaaatcccttt
gaaaacttgcgttttgaacctctgacctttgccaaagctgcttatttgagtgaattggta
gaatgctttttcaaagtcggaactggccaagcttttttttctttttttgaggaaagtctt
tacgtgctaaacaagggccttgatttttggcctcttttaaagattagctttgagctttct
cttttaaaagctagcggttttttcccttatcttggagaaagctgcctgcgctgtgaaaag
cctttgaagagagatgtctttttttcttttacagagggcggggtggtctgtgaaaattgt
gcatttgaagaggattttgccctcgatttgaaattgctggcttttttgaatcatattgcc
catgtaagccccatgcgtttaaggataatcaaaccaggtgccgaaaaccttaaaagggcg
gaaaggttaatagaaaattttgtattgcgggttttaaatcaggaaattaattctttacga
gtcttaaaagaaatgtttaacaataaaagtttagctaacagtcatggaggtcggccttga
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