Thermodesulfatator indicus: Thein_0938
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Entry
Thein_0938 CDS
T01546
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tid
Thermodesulfatator indicus
Pathway
tid03420
Nucleotide excision repair
tid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thein_0938
03430 Mismatch repair
Thein_0938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tid03400
]
Thein_0938
Enzymes [BR:
tid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thein_0938
DNA repair and recombination proteins [BR:
tid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thein_0938
MMR (mismatch excision repair)
Other MMR factors
Thein_0938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
DUF3553
AAA_22
AAA_12
ResIII
TPR_NPHP3
Cdc6_lid
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEH44812
UniProt:
F8AD80
LinkDB
All DBs
Position
989930..992038
Genome browser
AA seq
702 aa
AA seq
DB search
MKYRIDYANELNPAQLEAVRNLFGPVLVIAGAGSGKTRTLVYRVARLVEEGVPPERILLL
TFTRKAAREMLRRAAILLDEKCENVSGGTFHSLAHLMLRQYGYLIGYSRNFTILDRGDAE
DAINLLRTALGLADRKRRFPRKETIASIFSMAVNKRISLEEVVTEEYPHFLDDLEDLARL
FEHYVRYKQEHQLMDYDDLLVNWYRVLKGFPEVRREIGRRFEFIMVDEYQDTNALQAEIV
RFMAEEHGNVMVVGDDSQSIYAFRGANFKNIIKFPKLFPGTKIIKLEENYRSRQPILDLA
NTVIEYAKEKYTKCLFTRLEGGNIPVLYKARDEADQSRFIADRILELREEGVPLSEIAVL
FRSAYHSFDLELELAKRNIPFVKQGGMKLIETAHIKDVVAHLRLLVNPYDMLAWNRVLLL
IEGIGPKTSKRLMEYLKVEDDPFEALSRYSAKPSFAKGLNKLAELFGKLRQKLSPEEKLA
LLYEYYEPIFERVYYDDHPKRAKDLDQLLAIAHKYETVEDFLADLALEPPEASVAEVEAL
ENEDEKLVLSTVHSAKGLEWHSVFVISLAEGRFPSSYALGKEESIEEERRLFYVAVTRAK
ENLFLTYPATYYSPGEGRIFSKPSRFLEEVKDKLKPWYEEETSFIEEEEEVSSSFKPGEI
VWHPIFGEGKVKRMADIDKVVVQFTSAGERTLHLKFARLERL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccgcattgattatgctaatgaattgaaccctgctcagcttgaggccgtaaga
aacttattcggtccggttctggtaattgctggagcaggttcaggtaagactcgtactctc
gtttatcgggtggccaggctggttgaagaaggtgttccgccagagcgtatccttctttta
acttttacccgcaaagctgcgcgggagatgcttcgtcgagcagccattcttcttgacgaa
aagtgcgaaaatgtctcagggggtacgtttcattctctggctcatttgatgctcaggcaa
tacggctatctcattggttattcgcgtaactttaccatccttgaccgcggcgacgccgaa
gacgctatcaatcttttacgcacagctctgggcctggccgaccgcaagcgtcgtttccct
cgtaaagaaaccatcgcttcaatcttcagcatggcggtaaataaaagaatatcgcttgaa
gaagtagttactgaggagtatccccattttcttgatgatctggaagacttagccaggctt
tttgaacattacgttcgctataaacaggaacatcagctcatggactatgatgacctcctg
gtcaactggtatcgtgtgttaaaaggctttccagaggtcaggcgtgagataggaagacgc
tttgaatttatcatggttgacgaataccaggacactaatgcccttcaggcagaaatagtc
cgctttatggccgaagagcacggaaacgtgatggtggtaggtgatgattctcagtctatc
tatgcctttcggggggctaactttaaaaacataattaaatttccaaagttgtttccgggc
acgaaaataataaaacttgaagagaattaccgttctcgccagcctattcttgacttggcc
aacacggtaattgagtacgccaaagaaaaatacaccaagtgcctttttaccagacttgag
ggaggaaatattcctgttttatataaggcccgtgacgaggctgatcagagccgttttatc
gctgaccgcatacttgagttacgcgaagagggcgtgcctctttcggaaatagccgtgctc
ttccgttcggcttatcattcttttgatttagagctagagctagctaaaaggaatatcccc
tttgtaaaacagggcggcatgaagcttattgaaaccgctcacatcaaagacgtagtggct
catttacgcctcctggtgaatccttatgacatgcttgcctggaaccgtgtcttgcttttg
attgaagggataggccccaaaacttccaaacgccttatggaatatctcaaagttgaagat
gacccctttgaagccctttcccgatattcggccaagccttcttttgctaaaggcttaaac
aaacttgctgaacttttcgggaagcttagacaaaagctatctccagaagaaaaattggcc
ctactttatgaatactatgagcccatttttgagagagtctattatgatgaccatcccaag
cgggccaaagaccttgaccagcttttggctatagcccataagtatgaaactgtagaagat
tttctggctgatctcgcccttgagcccccagaagccagtgtagctgaagtggaagccctg
gaaaacgaagatgaaaaactggttctttcaacggttcattcggctaaagggcttgagtgg
catagcgtatttgtaatctctctggcggaaggccgtttcccttcaagttatgcccttggc
aaagaagaatccattgaagaagaaagaaggttattttacgtggcggtgaccagggccaag
gaaaatttattccttacctacccggcaacttattattctcctggagaggggcgcatattc
agtaagccttctcgctttttggaggaagttaaagataagttaaaaccgtggtacgaagaa
gagacttcttttatagaagaggaagaagaggtgtcctcgtcatttaaaccgggagaaatt
gtatggcacccgatttttggtgagggcaaagtcaaacgcatggccgacattgataaagtg
gtagtccaatttacctcagccggagaaaggactcttcatctaaagtttgcccgtctagaa
aggctttaa
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