Thermodesulfatator indicus: Thein_1315
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Entry
Thein_1315 CDS
T01546
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tid
Thermodesulfatator indicus
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tid03016
]
Thein_1315
Enzymes [BR:
tid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Thein_1315
Transfer RNA biogenesis [BR:
tid03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Thein_1315
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEH45182
UniProt:
F8A8U2
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All DBs
Position
1376215..1378200
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AA seq
661 aa
AA seq
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MKEKDYSGHLIEFAEQGRTQTAYCLGQKDRRLRVLLPTGREELLPRTRVLHISKRAYRAP
HRQEQLEIIKEADNRREALKQEIDLETLWELVVDDTEEMSPEELAEIYFGEGADDDHAAA
IIRAVLEDRLYFRFKEGNIYIPSREEVSRLKEAKRKEAERLARREQGAAWLKSLLTKETY
DVEDNIKNYWLKALKEYLLFGDEAQNAKETKELLKRVGADRPGKVFEILVSTGIFTEDEN
LELLRFDVKEAFPEEVEKAAQEIVAQGFSREDREDLTELLPVTIDGPETRDFDDAIHFVQ
HDDALEVGIHIADVSAFVPKESPIFREALNRGSTIYLPDRIIPMLPRVISEEAASLIAGK
ERPALSFIIKLSPDGEIKEFRLVRSVIKVAKRLTYDEADAFLESDFKPLYKMAEKLFNRR
LAAGALPVYLPEINLRVEDGHIILERIEITGARFLISEYMILANYVAALFLKENQIPAIY
RSQPKPKERLISGGEQDIFLNFMQLRQLSRGEMLLSPEFHHGLGLPCYTTVTSPIRRVID
LIMEHQLCHFLKTGKPCFSLEEIEEFAKEISRALEVVNTIKNKTYRYWLLKYLKQNARNR
PLDALVIDIHQRKAKVLLLDFMLTVDVPLPPSLRLQPGEKVKVILKGIQPREETIRAFLA
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaaaaagattattctggacatttaatagagtttgccgaacagggacgcacccaa
acggcctattgtcttggccaaaaagaccgtcgtttaagggtgcttttgcctacaggtcgc
gaagaactccttccccgtactcgggtcctgcatatttctaaaagggcctatcgggcccct
catcgtcaagaacagctggaaattataaaagaagcagataaccgtcgagaagctttaaaa
caggagatagacctggaaactctctgggaactggtggtagatgacactgaagagatgtcc
cctgaagagcttgccgagatttactttggtgagggggctgatgatgatcacgccgcggct
atcataagggctgtactagaagaccgcctttattttcgttttaaggagggaaatatctac
attccttctcgcgaagaagtaagccgtttaaaagaagcaaaaagaaaagaagcggaacgt
ctggctcgtcgtgaacagggagcggcctggctcaaatctcttttgactaaagaaacctac
gatgtagaagacaatataaaaaactactggctaaaagccttgaaagaatacctgctcttt
ggcgatgaggcccaaaatgccaaagaaaccaaagagctcttgaaaagggtaggggccgat
aggcccggaaaagtttttgaaattttagtctcaaccggaatcttcacggaagacgaaaat
cttgagcttttacgctttgacgtcaaagaagcctttcccgaagaagtagaaaaagccgct
caagaaattgtagctcaaggttttagccgggaagaccgtgaagacctgactgaacttttg
cctgtcactatagatggcccagagaccagagactttgacgatgcaatccattttgttcaa
catgatgacgcacttgaagtaggaattcatattgccgatgtttcggcctttgtgcctaaa
gagtcccccatattccgtgaggccttaaaccgagggtcaactatttatttgcctgaccgg
attatccctatgcttccgcgggtaatttccgaagaagcagctagtttaatagccggaaaa
gaacgcccggcactatcttttatcataaagctttctcctgacggcgaaataaaagagttt
cgcctggtgcgttcagtcataaaagtggccaaaaggcttacctatgacgaagccgacgct
ttccttgagtcagacttcaagcccctttataaaatggctgaaaaactttttaacaggcgt
cttgcagccggggccttgcctgtttatctgccagagataaaccttagggtagaagatggt
cacattatccttgaacgcattgagattaccggcgcaagatttttaatttctgaatacatg
atccttgccaattatgtagcggctctctttttaaaagaaaaccagattccggctatttat
cgcagccagcctaaacctaaagaacgtttaatttctggaggagaacaggacattttcctt
aattttatgcaattaaggcagctttcccgtggtgaaatgctactttcaccagagtttcat
catggcctgggcctcccctgttatacgacggtgacttctcctatacgtcgggttatagac
ctaatcatggaacatcaactctgtcatttcctaaaaacaggtaaaccttgttttagtttg
gaagaaatagaggaatttgccaaagaaatatcccgcgccttagaagtggttaataccatt
aaaaacaagacttatcgctattggctactcaaatatctaaagcaaaacgctcgcaaccga
cctttagacgctttagtcatagatatccatcaacgtaaagccaaagtattattgctagat
tttatgctaacagttgatgtgcctctccctccgagtttgagactccagccaggagaaaag
gtcaaagtaatacttaaaggtattcaacctcgcgaagaaaccattagggcctttttagcc
cactaa
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