Thermodesulfatator indicus: Thein_1490
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Entry
Thein_1490 CDS
T01546
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tid
Thermodesulfatator indicus
Pathway
tid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thein_1490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tid03021
]
Thein_1490
03400 DNA repair and recombination proteins [BR:
tid03400
]
Thein_1490
Enzymes [BR:
tid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thein_1490
Transcription machinery [BR:
tid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thein_1490
DNA repair and recombination proteins [BR:
tid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thein_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
Hpr_kinase_C
Spectrin_7
Rpn13_ADRM1_Pru
Motif
Other DBs
NCBI-ProteinID:
AEH45352
UniProt:
F8AA62
LinkDB
All DBs
Position
1553328..1554341
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AA seq
337 aa
AA seq
DB search
MAETKNLISRNWLELIRPKGIQVHNDSRPPSYGKFIIEPLERGFGVTLGNALRRVLLSSL
QGAAITWVKIDGTTHEFSSLPGVMEDVIDIILNLKGVRFRLHDEEPKTFFLEKEGPGEVK
AGDIQTDGQAEVVNPDHHIATLSKDGHLKMELHVEWGKGYRPADSSSVEEIGIIPVDAIF
SPIQRVNFNVTQARVGRSSDFDRLVMEIWTDGTVDAQDAMAYAAKILKDQLTVFINFAEE
DTSEEKSAEESKPEYYKYLDKRIDELELSVRSANCLRNANIRYIGELVQKTEPEMLKTKN
FGRKSLNELKNILSSMGLSFGMQIPDWKPPEEAKEEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccaaaaatcttataagcaggaattggctggagctcattaggccaaaaggt
attcaagtgcacaatgattccaggcctccttcttacggtaagtttatcatagaacccctg
gagcgagggtttggagtaactttgggtaatgctttgagaagggttcttttatcttcgctt
cagggagcagccattacctgggtaaaaatagacggaactacgcatgaattttccagtctt
cctggtgtaatggaagatgttatcgatataattttaaacttaaagggtgtccgttttagg
cttcatgatgaggagcctaaaacttttttccttgaaaaagaaggtcctggagaagttaaa
gcaggtgatatccaaacagacgggcaggcagaagttgtaaatcctgatcatcatattgcc
accctctctaaagacggccatctaaagatggaacttcacgtagaatggggaaagggttat
cgccctgcggattcttcaagtgtagaagagataggtatcatccctgttgatgctattttc
tctccaattcaaagggttaactttaacgtgacccaggctcgagtggggcgtagtagtgat
tttgatcgcttagttatggaaatttggactgacggaacggtcgatgctcaagatgctatg
gcctatgcagccaagattttaaaagatcagctaacagtttttattaattttgctgaggaa
gacacttcagaagaaaaatcagctgaagaatcgaaaccagagtactataagtacttagac
aaaagaattgatgaacttgagctttcggtaaggtcagctaactgtttgagaaacgctaat
atacggtatattggtgaactcgttcagaaaactgagccagaaatgcttaagaccaagaac
tttggacgtaagagccttaacgaactaaaaaatatattgagttctatggggctttctttt
ggaatgcaaattcctgattggaagcccccagaagaagctaaagaagaagcatag
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