Thermodesulfatator indicus: Thein_1515
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Entry
Thein_1515 CDS
T01546
Name
(GenBank) Sigma 54 interacting domain protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
tid
Thermodesulfatator indicus
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tid03400
]
Thein_1515
DNA repair and recombination proteins [BR:
tid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thein_1515
TLS (translesion DNA synthesis) factors
Other SOS response factors
Thein_1515
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_22
AAA_15
AAA_16
NACHT
DUF3450
IL2
Baculo_p24
RsgA_GTPase
AAA_29
AAA_7
CorA
Perilipin
Motif
Other DBs
NCBI-ProteinID:
AEH45376
UniProt:
F8AAF6
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All DBs
Position
1574522..1576141
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AA seq
539 aa
AA seq
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MLLELRLKNFVLIEEARLSFEPGFVVFTGETGTGKSLLIKSLKLALGARSSPGLIRPGAK
EAILEAVVSADERTKRHLEKFGLEPTHELIIRRVITPDRSRAYLNGSPVTLQMLSEILSD
LVVIAGQHEYQTLNKPEERLLTIDTFGELFSLRKAYEEAYLDFRQKLEKLQSLQEKVKNA
LKEEDFLKFQLQEIEAVSPEPGEDIEIEEKLKRLKNLARLKDLASNANAGVEKSFSLVSA
AKKSLGQALEFDKKLAPLAERLETLSYELEDVSLELSDYLRSLEIAPDELEALEERLFAI
KRLKRKYGPTLEDVLSHYEKIKKDLEDISTGEEHLQELEEEAKLAEKKALELAEELSNRR
KQTAELLSQNVNRLLKELALEGARFRISFTRKDLSPTGFDQVEFLVTTHPKAPWRPMAEV
ASGGELSRFFLAIKAALSKRASAQALIFDEIDAGVGGMVAHRLGKLLAELATNYQVICVT
HLPQIAALASQHFVVEKEITSDEALTSIRPLSNEERVEEIARMLGDPTARDVAKKLLGL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcttctggaattaaggcttaagaacttcgttttaatagaagaggcccgactcagtttt
gagccgggctttgttgtttttaccggtgagacggggacaggcaaatcccttttaataaaa
agtctaaaactcgcccttggggcgcgcagcagcccgggccttattaggccaggagctaaa
gaggccatccttgaagccgtagtctcagctgacgagagaacgaaaagacaccttgaaaaa
tttggccttgagcctactcatgaattaattataaggcgagtcattactcctgaccgctcc
cgggcctatcttaacggttctccagttacccttcagatgctttcagaaattttaagtgat
ctcgtagtcattgctggccagcacgagtatcagacacttaacaagcctgaagaacgcctt
cttaccattgatacctttggcgaactattttctttaagaaaagcttacgaagaggcctat
cttgactttcgtcaaaaactagaaaagctccaatcccttcaagaaaaggtaaaaaacgcc
ttaaaagaagaagacttccttaagtttcaactgcaggaaatagaggctgtctcccctgag
ccgggagaagatatagagatagaagaaaagctaaagcgcctcaaaaacctggcccgcttg
aaagatcttgccagtaacgctaacgcaggagtggaaaaaagtttttctttagtttctgcg
gccaaaaagtctctgggccaggcgttagaatttgataaaaaacttgcacccctagccgaa
aggcttgaaacactcagctacgagcttgaggatgtaagtcttgagctttctgattatttg
agaagccttgaaattgccccagatgagttagaagccctggaggagaggctttttgccata
aagcgtttgaagcgcaaatacgggcccacacttgaagacgtgctttctcattatgaaaaa
ataaaaaaagacctggaagatatttctacaggtgaagaacacttacaggaacttgaagaa
gaagccaagcttgccgaaaagaaggccttggagctggccgaagaactttctaacaggcgc
aaacagaccgctgagcttttaagccaaaatgtaaacaggctccttaaagaacttgccctt
gaaggagcaaggtttcgtatttcctttacgaggaaagatctttctcctacaggttttgac
caggttgagtttttagtcaccacccatcctaaagccccttggcggcccatggctgaggtg
gcctcagggggtgagctttcgcgtttctttctggccataaaggccgcgctttcaaaaaga
gcctcggcccaggcccttatttttgacgaaatagacgcaggtgttggcggtatggtggcc
catcgtttagggaagcttctggcagaacttgctaccaattaccaggtaatctgcgttacc
cacctgccgcaaatagctgccctggccagccagcactttgtggtggaaaaagaaattaca
agcgatgaggcccttacttccataaggcctctttcaaacgaagaaagagtagaagaaatt
gcccgcatgctaggcgaccctacggccagagacgtagctaagaaacttcttggcctatga
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