Thermodesulfatator indicus: Thein_1698
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Entry
Thein_1698 CDS
T01546
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tid
Thermodesulfatator indicus
Pathway
tid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thein_1698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tid03019
]
Thein_1698
Enzymes [BR:
tid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Thein_1698
Messenger RNA biogenesis [BR:
tid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Thein_1698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AEH45556
UniProt:
F8AB98
LinkDB
All DBs
Position
complement(1760513..1761880)
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AA seq
455 aa
AA seq
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MLNIAFEVIFDKALKQRRNGMAEVAADIQKEIRPLTVPLHGRPFRAFPLHPDLLGILEEK
GFTKTTIIQDLFLPQALRGHDVIVKARRGSGKALAYIVTILDRFLRKPPQKNEAIVLVTN
PERAIELLSLTRELAKPFSFSLTAFAAKEKIPEEQLKAVERGPNLIFTTPYWLSRLLKWK
IIHPQNLKILVLDEFDQMALENRTLLESVLSNLPLPGERQGLAFMENIRYEALELAYKFL
KEPDEIYIEIGRVDFSNLNLSLFHVSSEEKFMLLLGVLDKHHWPKTIIFVNNKLEAQKLC
DELKKLGAKAVFLKPDLGPEYRLRFLKQFAGKEADILIATDAGCRFIQQDGVPLLINFDL
PETAEEFRQRALKVKEGGTIISFCDEEGAFFLEFIEKELGFKIPVSWPEPEEEWFLSPVI
AREKIAKKYKPLSKKPTSQKLKRPRRPLRPKKTGR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatatcgcttttgaagtcatctttgataaagctttaaaacagaggagaaacggt
atggcagaagtggcagctgatattcaaaaagaaattcggcctctcaccgtgcctttacat
ggtcgcccttttcgggcttttcctctgcatcctgatcttttaggcattcttgaagagaaa
ggctttacaaaaaccaccattatccaagatcttttcttacctcaagcccttagagggcat
gatgtcattgttaaagccagacgtggaagtggtaaagccttagcttatattgtcaccatt
ttagatagatttttgcgcaagccaccccaaaagaacgaagccattgtcctggtgactaat
cctgaaagggctattgagcttttgtctcttactagggagctagctaagcctttttctttc
agtcttacagcctttgccgctaaagaaaaaatcccagaggaacaactaaaagctgttgaa
cgcgggccaaatttgatattcaccactccttactggcttagccgtcttctcaaatggaaa
attattcaccctcagaatctaaaaattttggttcttgacgaatttgaccaaatggccctt
gaaaaccgtactcttctagaatctgttctttctaatcttcctctacctggtgaacgtcaa
gggcttgcttttatggaaaatattcgttatgaggccctggaactcgcctataaatttctt
aaagaacctgatgaaatatatatagaaattggacgagtggacttttccaatcttaatctt
tctcttttccacgtatcttctgaagaaaaatttatgcttcttttaggtgttcttgataaa
catcattggcctaagaccattatttttgtgaacaacaagttagaagcacaaaaactctgt
gatgaactcaaaaaactaggggccaaagctgttttccttaaacctgacctggggccagaa
tatcgtttgcgatttcttaaacagtttgccggaaaagaggccgacatcttgatagccact
gatgctggttgccggtttatccaacaagatggggtccctcttctaataaactttgatctt
cctgaaacggccgaagaatttcgccagcgtgccttaaaagttaaagaaggtgggactatt
atttccttttgtgatgaagaaggggccttttttctggaatttattgaaaaagaactgggt
tttaaaattcctgtttcctggccagagcctgaagaagaatggttcctttctcctgtaatc
gccagagaaaagattgccaagaagtataaacctttgtccaaaaagccgacttcccaaaaa
cttaaacggccacggcgtcctttaaggcctaaaaaaactggccgttaa
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