KEGG   Thermodesulfatator indicus: Thein_2168
Entry
Thein_2168        CDS       T01546                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tid  Thermodesulfatator indicus
Pathway
tid03410  Base excision repair
tid03430  Mismatch repair
tid03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Thein_2168
   03430 Mismatch repair
    Thein_2168
   03440 Homologous recombination
    Thein_2168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tid03400]
    Thein_2168
DNA repair and recombination proteins [BR:tid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Thein_2168
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Thein_2168
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Thein_2168
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 PhoU
Other DBs
NCBI-ProteinID: AEH46016
UniProt: F8ADQ8
LinkDB
Position
2248260..2249963
AA seq 567 aa
MKKDPFWVVAPLNRELTLKLASELELPPLLIHILLTRGLNDPHEIYRHLNPKLSDFPDPF
LLEDMEIAVKRLIKAIQTRENIAIYGDYDVDGTTGAAIVYLFLKELGLEPQVIFPHRERD
GYGLHPHLVASLKEKGITLLISVDCGISAYEACQVAREKGLDVIITDHHEVPEKLPEALA
VINPKRRENRYPFKELAGVGVAFALLRALRQRLYEEGFFSKSPPKLKSYLDLVALGTVAD
IVPLFGENRLIAWFGLEELKQSKRPGIKALKKLTGLENGRLDTNSIMFRLAPRINAAGRL
KEAMLAFKLFITEDEEEAQNIAEELHQLNTKRQQIEDRILKEALSQIEKNLGFDRLSYVL
ASEDWPPGVIGIVASRLQETFYRPVILLSLKDGLARGSGRSIPEINLYQCLADCCQHLKA
FGGHPAAAGLKILEKDIEAFAKEFEEIVKARLDGKIPKPRLQLDAWVRVKHILDPCFLEN
FMKLEPFGPGYPEPLFGLRNFQVRNISLVKEKHLKFFIWQEGVGLEAVAFRFGNSIPETI
KALAGNLEITSFQGRNYLQLRIKDLKN
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaaaaaagaccccttctgggtggtagctccacttaatcgagaactcactttaaaattg
gccagcgaactcgagttacccccccttttaattcatatcctgctaacacgcggattaaat
gacccgcatgaaatttatcgtcatttaaatcccaaactttcagactttccagatcctttc
cttctagaggacatggaaatagcggtaaaaagattaatcaaggctatccaaacccgggaa
aacattgctatttacggtgactatgatgtagacggcactactggtgctgccattgtttat
ctttttttgaaagaacttggacttgagccgcaggtcattttccctcatcgcgaaagagat
ggttatggactccaccctcacctggtagcttccctcaaagaaaaaggtataaccctttta
atctcagttgattgtggcatcagtgcctacgaagcctgtcaggttgcccgggaaaaaggg
cttgatgttattattaccgaccaccacgaagttccagaaaaactgccagaagccttagcg
gttattaaccccaaaagaagagaaaatcgctatccctttaaagagcttgccggagtaggc
gtggcctttgcccttttacgggcccttagacaaaggctctacgaagagggatttttctcc
aagagcccaccgaagcttaaaagttatcttgacctggtagctttgggtactgtcgccgat
atcgtacccttgtttggtgaaaatcgtctaattgcctggtttggactggaagaactaaaa
caaagcaaacgaccggggattaaagcccttaaaaaactaacgggccttgaaaacggccgc
ttagataccaacagcattatgtttcgcctggccccgcgaataaacgctgctggtcgttta
aaagaggctatgcttgcttttaaactttttattacggaggatgaagaagaggcccaaaat
attgctgaagaactccaccaattgaacaccaaaagacagcaaatagaagatcgcatttta
aaagaggccctttcccaaatagaaaaaaatctcggttttgaccgcttatcttatgtgctt
gccagtgaagactggccacccggcgtaattggtattgtggcttcaaggcttcaggaaact
ttctatcgaccagtaattttgctttcattgaaagacggacttgcccgaggttctggccga
agtataccagaaataaacctttatcagtgcttggcagactgctgtcagcatttaaaagcc
tttggcgggcatcccgcagccgctggccttaaaatacttgaaaaagacatagaagccttt
gccaaagagtttgaagaaatagtcaaagcgagacttgatggaaaaattcccaaaccccgt
ctccaattggacgcttgggtcagagtaaaacatattcttgatccctgttttttagaaaat
tttatgaagctcgaaccttttggtccgggataccctgaacctctattcggtttgagaaac
tttcaagtaaggaatatatcccttgtcaaagaaaaacacttaaaattttttatatggcag
gaaggcgttggccttgaagcagtagcttttcgttttgggaattccatccctgaaaccata
aaagcccttgcgggaaaccttgaaattacaagctttcaagggagaaattatttgcaatta
aggattaaagacctgaaaaattaa

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