Thioploca ingrica: THII_0248
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Entry
THII_0248 CDS
T03616
Name
(GenBank) RNA polymerase Rpb6
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
tig
Thioploca ingrica
Pathway
tig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THII_0248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tig03021
]
THII_0248
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_0248
Enzymes [BR:
tig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THII_0248
Transcription machinery [BR:
tig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THII_0248
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THII_0248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAP54545
UniProt:
A0A090AIB4
LinkDB
All DBs
Position
279084..279308
Genome browser
AA seq
74 aa
AA seq
DB search
MARLTVEDCLKHVNNRFNLVLLASKRARQLAMGATPLVPVENDKPTVVALREIAAGKVTP
ENFEKLDAGVSSLR
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccttaccgtagaagattgcttaaaacatgttaataatcgttttaatctggta
ttactcgccagtaaacgtgctcgtcaattagcgatgggcgcaacacctttagtccccgtt
gaaaatgacaaaccaaccgtcgtcgcgttgcgagaaatcgctgccgggaaagtgacgccg
gagaattttgagaaactcgatgcgggggtaagttcactcagatag
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