KEGG   Thioploca ingrica: THII_0248
Entry
THII_0248         CDS       T03616                                 
Name
(GenBank) RNA polymerase Rpb6
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
tig  Thioploca ingrica
Pathway
tig03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THII_0248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tig03021]
    THII_0248
   03400 DNA repair and recombination proteins [BR:tig03400]
    THII_0248
Enzymes [BR:tig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     THII_0248
Transcription machinery [BR:tig03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     THII_0248
DNA repair and recombination proteins [BR:tig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      THII_0248
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAP54545
UniProt: A0A090AIB4
LinkDB
Position
279084..279308
AA seq 74 aa
MARLTVEDCLKHVNNRFNLVLLASKRARQLAMGATPLVPVENDKPTVVALREIAAGKVTP
ENFEKLDAGVSSLR
NT seq 225 nt   +upstreamnt  +downstreamnt
atggcacgccttaccgtagaagattgcttaaaacatgttaataatcgttttaatctggta
ttactcgccagtaaacgtgctcgtcaattagcgatgggcgcaacacctttagtccccgtt
gaaaatgacaaaccaaccgtcgtcgcgttgcgagaaatcgctgccgggaaagtgacgccg
gagaattttgagaaactcgatgcgggggtaagttcactcagatag

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