Thioploca ingrica: THII_0423
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Entry
THII_0423 CDS
T03616
Name
(GenBank) secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tig02044
]
THII_0423
02035 Bacterial motility proteins [BR:
tig02035
]
THII_0423
Secretion system [BR:
tig02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
THII_0423
Bacterial motility proteins [BR:
tig02035
]
Pilus system
Pilus assembly proteins
THII_0423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_14
AAA_22
nSTAND3
AAA_16
AAA_30
AAA_19
AAA_7
AAA_23
AAA_11
NTPase_1
AAA_29
SRP54
ABC_tran
cobW
AAA_18
AAA
ResIII
FtsK_SpoIIIE
AAA_5
Rad17
AAA_28
ATPase_2
AAA_33
TrwB_AAD_bind
MobB
TsaE
ATP_bind_1
NPHP3_N
UvrD-helicase
NACHT
Herpes_ori_bp
AAA_25
DEAD
DUF87
PRK
APS_kinase
Pox_A32
RNA_helicase
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BAP54720
UniProt:
A0A090AIP6
LinkDB
All DBs
Position
479501..481207
Genome browser
AA seq
568 aa
AA seq
DB search
MGALSKPAHRLGDILLEQHIITSDQLKIALIEQKKNHQQLGKILIGLGFVSEAVIRDLMS
ESLGQTSVDLSKLVVDHEAIRMVPKHLAERYTLLPINFDKAINRLTVAMADVFNVLALDQ
LASALGGRIKIEPVIAGEAEIINGIDNWYGFDLSIDGILNEIETGEVDYQSLAISRDEYS
QPLVRLVDALLSDAVKRSASDIHFEPEKGFLRVRYRIDGVLQQVRSLHKNYWSAIVVRLK
VMSSLNIAETRVPQDGRMSLTLGGRPIDFRVSAQPTVYGENIVLRILDSQRGIMTLEHLG
LLEENLIALKLMIARPEGVILITGPTGSGKTTTLYSLLQHLNTEEVNIMTLEDPVEYVLG
QVRQTAVNEAVKLDFATGIRSMMRQDPDIILVGEIRDVDTAQMAFRAAMTGHQVYSTLHT
NSAIGAIPRLLDIGILPDIMAENIIGIVGQRLVRKLCLGCKQAYLPSDMHQMLLDLKEQQ
SVTLYTPSSCEQCGHRGYKGRLALMEIFRLDESVQDLIAHRATTYDLRQHAQRMGFRTLA
QDGIRRVLEGVSSLEEISRVVDLTSRLN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcattaagcaaacccgctcatcggctgggtgacattttgctagaacaacatatt
atcacgtcagaccaacttaaaattgctttaatcgagcagaaaaaaaatcatcaacaatta
ggtaaaattttaattggtttaggctttgtttccgaagcggtcattcgagatttaatgagt
gaatcgctggggcaaacgagtgtcgatttatccaagctcgtggtcgatcatgaagccatc
cgaatggttcccaaacatttagccgaacgttacacgttactgcccattaactttgataaa
gcgattaaccggcttaccgtcgccatggcggatgtgtttaatgtgttagccctcgatcaa
ttggcttcggcactgggtggtcggatcaaaattgaacccgtaatcgctggtgaagctgaa
attatcaatggcattgataattggtatggttttgatttatccattgatggcattttaaat
gagatcgaaacgggagaagttgattaccaaagtctagccattagtcgtgatgaatacagt
caaccgctggttagattagttgatgctttactctctgatgcggtgaagcgaagtgcttcg
gatatccactttgaaccagaaaaaggctttttgcgagtacgctaccgcattgatggcgta
ttacaacaagttcggagtttacataaaaattactggtcggctattgtggttcgtctcaag
gtcatgagtagcttaaatatcgccgaaacccgtgttccacaagatggtcgcatgtcattg
actttagggggacgccctatcgattttcgggtttccgcacaacccactgtttatggtgaa
aatattgtattgcggattctcgatagtcaacgcggtattatgaccttagaacatttaggc
ttgttagaagaaaatttaatcgcgttaaaattgatgatcgcacgtcctgaaggcgttatt
ttaatcaccggaccgaccggtagcggtaaaacgactactttatattctttgctgcaacat
cttaataccgaagaagtcaacattatgaccttggaagatccggttgaatatgtcttagga
caagtacgacaaacggcggtcaatgaagccgttaaattggattttgcgactggaattcgt
tccatgatgcgccaagatccggatatcatcctcgtaggagaaattcgggatgttgatacc
gcgcaaatggctttccgcgctgccatgacgggacatcaagtttattcaactttacatacc
aattcagcgattggcgctattcctcggttgttagatattgggattttgccggatatcatg
gcggaaaatattattggtattgttggacaacgcttagtacgcaagctctgtttgggctgt
aaacaagcttatctacccagtgatatgcaccaaatgttattggatttaaaagaacaacaa
tcggtcactctgtatacacccagtagttgtgaacagtgtggacaccggggttataagggt
cgtttggctttaatggaaatttttagattagatgaatcggtgcaagatctgattgctcac
cgtgcgacgacttatgatcttagacaacatgcacaacgaatggggttccgtactttggcg
caagatggaattcggcgagtacttgaaggggtttccagtttagaagaaatttctcgggtg
gtggatttaacgagtcggttgaattaa
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