Thioploca ingrica: THII_0988
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Entry
THII_0988 CDS
T03616
Name
(GenBank) lipid A core-O-antigen ligase-like enzyme
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
tig
Thioploca ingrica
Pathway
tig00540
Lipopolysaccharide biosynthesis
tig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
THII_0988
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tig01005
]
THII_0988
Enzymes [BR:
tig01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
THII_0988
Lipopolysaccharide biosynthesis proteins [BR:
tig01005
]
Core region
THII_0988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
OppC_N
Motif
Other DBs
NCBI-ProteinID:
BAP55285
UniProt:
A0A090AJY8
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All DBs
Position
complement(1188115..1189320)
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AA seq
401 aa
AA seq
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MITFFVYTRRVLVILIGFAIPISTALTNVLCPLAILLLLAEGQYKQKFNILSRHPLAVIA
LLLFTIMSLGFLYTPVNWVEAGRMLDKYRELLYIPLFILLFADEKTRRWGLYAFLSAMGV
TLFLSYLMTLTGWSIGKGTPQNAFVFKNYITQGLLLALAAYFLAVYAWQQQRWYWLVMIL
LALYNILFLSEGRTGYLIVFCLILLFSYQTYRLRGLIVGSLLLVLLSGLIYSYSDVVKKR
LDSVSENLQHYQQGETDTSVGLRLEFYKNSLVLIAQSPLWGHGTGSFRYEYQQLAQPQGI
TATTNPHNEYLMIGVQWGLMGMGLFIYLLYQLGLLAVYLPPPQNWMVQGLVVTIAVGCLV
NSLLLDTTEGHLFAYLIGVLMGGLNYPKAIFLFRRNHPETD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgataaccttttttgtttatacgcgacgtgttttagtcatcttaattggttttgctatt
cccatttccacggctttaacgaatgtgttgtgtcctttagctattttacttttgttggcg
gaaggacaatataaacagaaattcaatattctttctcgacacccgctggcggttattgca
ttactattatttactatcatgagtttaggttttttatataccccggtcaattgggttgaa
gctggacggatgttagataagtatcgagaattattatatattcccttgtttattctgttg
tttgccgatgaaaaaacgcgtcgttggggtttgtacgcttttttaagtgcgatgggcgtc
actttattcctttcttacctgatgactttaactggttggtcaattggcaaaggaactcca
cagaacgcttttgtttttaagaattacattacgcaaggattattactggcattagccgct
tattttttagcggtgtacgcgtggcaacaacaacgctggtattggctggtaatgatatta
ttagcactttacaacattttatttctgagtgaaggacgtaccggttacctgatcgtattt
tgtttaattttattattttcttatcaaacttatcgattgcgtggtcttatcgtgggtagc
ttattgttagtactgctgagtggattgatttatagttattccgatgtggttaaaaaacgg
cttgatagtgtttcggaaaatctacaacattatcaacaaggtgaaacggatacttcggtt
ggcttacggttagaattttataaaaatagtttagtgctcattgcccaaagtccgctgtgg
ggtcatggtaccgggagtttccgttatgaataccaacaattagctcagccccaaggaatt
actgcgacgactaatccacataacgaatatctcatgataggggtgcaatggggattaatg
gggatgggattatttatttatttattgtatcaattggggttgttagcggtttatttaccg
ccaccacaaaactggatggtacaaggattggtcgttaccatcgcagtgggttgtttggtg
aattcgttgttactcgataccactgaaggacatttattcgcctatttaatcggcgtttta
atgggtggcttgaactatcctaaagccatttttttatttcgtcgaaatcatccggagacg
gattaa
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