Thioploca ingrica: THII_1034
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Entry
THII_1034 CDS
T03616
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tig03016
]
THII_1034
Enzymes [BR:
tig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
THII_1034
Transfer RNA biogenesis [BR:
tig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THII_1034
Prokaryotic type
THII_1034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
BAP55331
UniProt:
A0A090BUL8
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All DBs
Position
1255117..1255884
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AA seq
255 aa
AA seq
DB search
MRIALGVEYAGTHFCGWQFQPHAPSIQGCVEAALSKVAHHPVTVICAGRTDTGVHALAQV
IHMDVTAQRSPRSWVLGANANLSKDISILWAQPVDEGFHARFSASARHYRYIILNRPTRP
ALLAKQVTWEHRPLNVEKMQVAANYLIGTHDFSSYRALACQAKNPIRTLSSLTVSRVDEQ
VIIEISANAFLHHMVRNIAGVLMTIGCGEQLPLWAKTVLESRNRTQGGVTAPASGLYLCG
VDYPSPYIFPKQSIL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgccttgggtgtcgagtacgccggaactcatttttgtggttggcaattccaa
ccacatgcgccttccattcagggttgtgtcgaagcagccttatctaaagtagctcatcat
ccagtaacggttatttgtgcaggacgtactgataccggggtacatgccctagcgcaggta
atacatatggatgttactgcacaacgttcgcctcgttcttgggtactcggagctaatgct
aatctttctaaagatatcagtattctctgggcacaaccggtggatgagggttttcatgct
cgtttttcggccagcgcccgtcactaccgctatatcattttaaaccgtcctactcgccca
gccctgcttgctaaacaagtcacttgggaacatagaccattgaatgtggaaaaaatgcaa
gtagcggccaattatttgataggaactcacgatttttcttcttatcgtgccttagcttgt
caagctaaaaaccccatccgcactttatcctccctaaccgtttctcgggttgacgaacag
gtcattattgagatttcagccaatgcttttttacatcatatggtacgtaacatagccggc
gtcttgatgactatcggttgcggtgaacaactacccctatgggcaaaaacagttctagaa
tcgcgtaatagaactcaaggtggagtaactgcaccggctagcggtttatatttatgtgga
gtagattatccttcaccttatatttttccgaaacaatcaatactttaa
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