Thioploca ingrica: THII_1176
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Entry
THII_1176 CDS
T03616
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tig03021
]
THII_1176
03009 Ribosome biogenesis [BR:
tig03009
]
THII_1176
Transcription machinery [BR:
tig03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
THII_1176
Ribosome biogenesis [BR:
tig03009
]
Prokaryotic type
rRNA transcription factors
THII_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_KhpA-B
CRAL_TRIO
Motif
Other DBs
NCBI-ProteinID:
BAP55473
UniProt:
A0A090ACK6
LinkDB
All DBs
Position
1404675..1406189
Genome browser
AA seq
504 aa
AA seq
DB search
MNKEILLVVDVVSNEKGVSKQIIFNALECALASATKKRYNNEIEVRVFIDPHTGDYKAFR
RWQVVEDRRLESPQLQISLTQAQEQNAAIQLGEFIEEAIESVNFDRIGAQTAKQVIVQKI
REAERAQIVEAYQDREGELVSGIVKRIERGNVILDLGGNAEALIPREDMIPREVVRPGDR
LRGYLYSIRPQPRGPQLFLSRTAPELLIKLFILEVPEIGENLLEIVGAARDPGLRAKIAV
KPKDPRIDPVGACVGMRGSRVQAISNELAGERVDIILWDDNPAQFVMNAMSPAEVVSIVV
DEDTHSMDVAVREEQLSQAIGRNGQNVRLASQLTGWTLNVMTESQAEEKNEAEARAVLEL
FMSELEVDEEVATVLVQEGFSSIEEIAYVPLNEMLQINEFEEEIVKELRNRAKDALLTRA
IVNEEKIDTDNPVIAEPQPAENLLALEGMSEEWAQALANRGIVNMDDLAEQSVEDLMSLE
GMNEVQAGKLIMAARAPWFVDEQP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaattttgctggtagtagacgtagtatctaatgaaaaaggggtgagtaaa
caaattattttcaatgcattagaatgtgcattagccagtgccaccaagaaacgttataac
aatgaaattgaggtgcgggttttcattgatccgcataccggtgattacaaagcctttcgt
cgttggcaagtggtagaagatcgtcgcttggaatcacctcagttgcagattagcttaact
caagcgcaagaacaaaacgcggcgattcagttaggggaatttattgaagaagctatcgaa
tcagtcaattttgaccgcattggtgcgcagactgctaagcaagtcatcgtccaaaagatt
cgcgaggctgaacgagcacagatcgttgaagcttatcaagatcgtgaaggtgaattggtt
agtggcattgttaagcgaattgaacggggtaatgttatcctggacttagggggtaatgct
gaagcactgattccacgtgaagatatgattcctcgagaagtcgttcgtccaggcgatcgg
ttgcggggttatttatacagcatacgtccccaaccgcgtgggccacaattatttttgagc
cgaaccgcaccggaattgttgattaaattatttattttagaagtacccgaaattggagaa
aatttattggaaattgtaggtgctgctcgtgaccctggacttcgtgctaaaatcgccgtt
aaacccaaagacccacggattgatccggtgggtgcttgtgtcggaatgcgaggctctcga
gttcaagctatttctaatgaactcgctggcgaacgagtcgatattattttatgggatgac
aatcccgctcagtttgtgatgaatgccatgtcacccgcagaagtggtttctattgtggtt
gatgaggatacacatagtatggatgtggcggtcagagaagaacaactgtcgcaagccatt
ggtcgtaatggacaaaatgtgcgcttagcgagtcaattgaccggttggactttaaatgtc
atgacggaatcacaagccgaagaaaagaatgaagcggaagcacgggcagtattggaacta
ttcatgtcagaattagaagttgacgaagaggtagcaacggttctcgtgcaagaaggtttt
tctagcattgaagaaattgcttatgtgcccctgaatgaaatgttgcaaattaatgaattt
gaagaagaaattgtcaaagaattacgcaatcgagccaaagatgctttactgacaagagcc
attgttaacgaagaaaaaattgataccgataatccggtcattgcggagccgcaaccagca
gaaaatttgctggctttggaaggaatgagcgaagaatgggcacaagcattggctaaccga
ggaattgtgaatatggatgatttggctgagcaatccgtagaagatttgatgtcccttgag
ggaatgaacgaagtgcaggcgggaaaactcattatggccgcacgagcaccttggttcgtt
gatgaacaaccatga
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