Thioploca ingrica: THII_1179
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Entry
THII_1179 CDS
T03616
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tig03016
]
THII_1179
Enzymes [BR:
tig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THII_1179
Transfer RNA biogenesis [BR:
tig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THII_1179
Prokaryotic type
THII_1179
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BAP55476
UniProt:
A0A090BUP7
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All DBs
Position
1409942..1410868
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AA seq
308 aa
AA seq
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MVRRKNGRDVHGILLLNKPAGISSNTALQRAKHLFQANKAGHTGSLDNLASGLLPICFGE
ATKLSRFLLEADKRYQAECTLGVTTTTGDAQGEVLQTRSIAQLNNQKIDEVTQSFIGTIQ
QIPPMYSALKHQGKALYKWARQGKTIPRQARSIMIYDLVVKRWIDQHLVIEVHCSKGTYV
RTLAEDIGEALGCGAHISALHRLSVGDYRDMVDFNTLEQSAQPEWEHLDQLLLPMHTLLS
HWPTIILTEELAHYLRQGQAVQVAHAPTQGWVKLVVTAKHSMTQWNQFLGIGQVLEDGRI
APRRLINL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtaagacgaaaaaatggccgtgatgtccatggtattttattactaaacaaaccggcg
gggatcagttctaatacagctttacaacgagctaaacatttgtttcaggcgaataaagcc
ggacataccggtagtttagataatttagccagtggtttattgcccatctgttttggagaa
gccactaaactatctcgctttctgttagaagccgataaacgttatcaagctgagtgtact
ttaggcgtaaccacaaccactggggacgcccaaggagaagtattgcaaacccgttcaata
gcccaattaaataaccagaaaattgatgaagttactcaatcgtttatcggtactattcaa
caaattccgccaatgtattccgcgttgaaacatcaaggtaaagcactttataaatgggca
cgacaagggaaaaccataccacgtcaagctcgttcaattatgatttatgatctcgtggtt
aaacgctggattgaccaacatctcgttatagaagtccactgctctaaaggaacctatgtt
cgtactttagcggaggatatcggtgaagcactcggttgtggtgctcatattagtgcctta
catcgtcttagtgtgggtgattatcgagatatggttgatttcaatacgctagaacaatct
gctcaaccagagtgggaacacttagatcaattgctcctaccgatgcacacgctgctttca
cattggccaacgattattttaactgaagaactcgctcattacttgcgtcaaggtcaagcc
gtacaggtcgctcatgcccctacccagggttgggttaaactggtggttactgccaagcac
tccatgacgcaatggaaccaatttttagggattggtcaagtattagaagatggtcgtata
gcaccacgacggctaattaatttataa
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