Thioploca ingrica: THII_1270
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Entry
THII_1270 CDS
T03616
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tig
Thioploca ingrica
Pathway
tig03030
DNA replication
tig03410
Base excision repair
tig03420
Nucleotide excision repair
tig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THII_1270
03410 Base excision repair
THII_1270
03420 Nucleotide excision repair
THII_1270
03440 Homologous recombination
THII_1270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tig03032
]
THII_1270
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_1270
Enzymes [BR:
tig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THII_1270
DNA replication proteins [BR:
tig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THII_1270
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THII_1270
NER (nucleotide excision repair)
GGR (global genome repair) factors
THII_1270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAP55567
UniProt:
A0A090AJ80
LinkDB
All DBs
Position
1511054..1513786
Genome browser
AA seq
910 aa
AA seq
DB search
MNKAMFNNDTLVLIDGSNYLYRAFHALPPLSNSQGMPTGAVYGITNMLKSLLAEYQPQYA
AVVFDAKEKTFREELYPDYKANRSAMPTELVSQISLTHEIVQALGLPLLMVSGVEADDVI
GTLAKQAESLGMSTLIFTGDKDFTQLVNNAIILIDSMKQTRLDVQGVIDKFGIPPELMLD
YLCLIGDSVDNIPGVDKVGPKTAVKWLTTYGSLAQIIAAADDIKGKVGENLRTALPHLPL
TRQLLTIRADVPLAYTPRQLQVKPYDISKLRQLFTQLEFKKWLAALPAEEIPATGSTRDE
TDQAKGIAKSSYHTVLTQAEFDNWLNRLQTAPLFAVDTETTSLDYLEAELVGISLAIQAG
EAVYVPLAHDYLGVPPQLPREQVLAALKPLLENPQQLKVGHHLKYDAHIFANYGIELQGI
AFDTLLESYVLNSTATSHSLNALASQYLQVETITFEDIAGKGKKQLTFNQIHLDKAAAYA
AADADITLQLHQKLWPQLQQFPPVQQIFTEVEIPLISVLKRIERNGVLIDATQLHEQSTF
LAQRLQMLEQAAYELAGIEFNLNSPKQLQTILFDRLKLPVLQKTPHHDPSTAVEVLEELA
IDYPLPQLILEHRQLSKLKSTYTDALPRQINPRTGRIHTSYHQAVVVTGRLSSSQPNLQN
IPIRTAEGRRIRQAFIAPPGYRLLAADYSQIELRIMAHLSGDQGLLAAFTSGQDIHRHTA
AEIFAIPIEAVTTEQRRQAKAINFGLMYGMQAFGLAKQLGIQRDEAQTYIKTYFARYPAV
KTYLEQVRNKAKQSGYVETVLGRRLFIPDIHSRNPQRRQYAERSAINAPMQGTAADLIKM
AMLKIDNWIQSQHPDIKMIMQVHDELVFEVAESIIAAAKIVIVEAMSQVAQLKVPLVVDV
GIGMNWEEAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaagccatgtttaataacgacactctggttttaatcgatggatctaattatctc
taccgtgctttccatgctttaccaccgctcagtaattctcaaggtatgcccaccggtgct
gtgtatggcataaccaatatgctgaaaagtttgttggctgagtatcaacctcaatatgcg
gcggtcgtatttgatgccaaagaaaaaacttttcgagaagaactttatcctgattacaaa
gcgaatcgctcagccatgccaactgaactggtttcacaaatttcactgactcatgaaata
gttcaagctttaggtttgcctttattgatggtcagtggagtggaagcggatgatgtcatc
ggcaccttagctaaacaagctgaatcgctgggaatgtcgaccctgattttcacgggtgat
aaagattttactcagttagttaataacgccattattttaattgacagcatgaaacagact
cgcctcgatgtgcaaggggtgattgataaatttggcattcctcccgaactcatgttagat
tatctatgtctcattggtgatagtgtcgataatattcctggggttgataaagttggaccc
aaaacggcggtaaaatggttaaccacgtatggttctttagcacaaataatcgcagcggca
gatgatatcaaaggtaaggtgggcgaaaatttacgcacggctttacctcatttaccgtta
acccggcagttattaaccattcgagctgatgtgcctttagcttatacaccccgacaattg
caggtaaagccttatgatatcagtaaattacggcaattatttacccaattagaattcaaa
aaatggttagccgcattgccggcggaggaaattccagccaccggttctactcgagatgaa
actgaccaagctaaagggattgctaaatcaagctatcatacggtattaactcaggctgag
tttgataattggttgaatcgattacaaaccgcgccgctgttcgcagttgataccgaaacc
actagtcttgactatctagaagctgagctagttggcatttcattggcgatacaagctggg
gaagcagtctatgtgcctttagcgcatgattaccttggcgtacctccccaattaccacgt
gagcaggtgcttgctgccctgaaacccttgttggaaaatccgcagcaactgaaagtggga
catcatttaaaatatgatgctcacattttcgctaattatggcattgaattacaaggcatc
gcttttgataccctattagaatcttatgtgctcaatagcacggcgacttcccatagtttg
aatgcgttagcgagtcaatatcttcaagttgaaaccattacttttgaagacatcgcgggt
aaaggtaaaaaacaactcacctttaatcaaattcatttggataaggccgccgcttatgcc
gctgccgatgcggatatcactttgcaattgcatcaaaaattatggccacaactgcaacag
tttcctccagttcaacaaatttttactgaagttgagatacccttaatttctgtcctgaaa
cggatagagcgcaacggagttcttattgatgccacgcaattgcacgaacaaagtaccttt
ttagcgcaacggttacaaatgctggagcaagcggcttatgaactggcgggaatagaattt
aatctcaattcccctaaacaattacaaaccattttatttgaccggttaaaattacccgtt
ctccagaaaactccgcatcacgatccttccacagcggttgaagtcttagaagaattagcg
atcgattacccgttaccacaattgattttagaacatcgtcagctcagtaaacttaaatcg
acttataccgatgcgttaccgcgacaaattaatccccgaaccggacgcattcatacctct
tatcatcaagcagtggtagtgaccgggcgattatcttcaagtcagcctaatttacaaaat
attcccatccgtactgctgaaggacgacgaattcgacaggcttttattgcgccacccggt
tatcgattattagctgccgactattcccaaattgaattaagaatcatggcgcatttgtct
ggtgatcaaggtttactggcggcttttacgagtgggcaagatattcatcgtcataccgcc
gccgaaatttttgccataccgattgaggcggttactactgaacaacgtcgccaagcgaaa
gcgattaattttggtctcatgtatgggatgcaagcctttggtttagcgaaacaattaggg
atacagcgcgatgaagcgcaaacttatattaaaacctactttgcccgttatccagccgtt
aaaacttacctggaacaggttcggaataaagccaaacaaagcggttatgttgaaacggta
ttaggacgacgtttatttattcccgatattcactcgcgtaatccccaacgtcggcagtat
gctgaacgtagcgctattaatgccccgatgcaagggacggctgccgatttaattaaaatg
gcgatgttgaaaattgataactggattcaaagccagcatcccgatattaaaatgataatg
caagtccatgatgaactggtttttgaagtggcagaatccatcatagcagcagccaaaata
gttattgttgaggccatgagtcaagttgcgcaattaaaggtgccgttggtcgtggatgtc
ggtattggaatgaattgggaggaagcacattaa
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