Thioploca ingrica: THII_1307
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Entry
THII_1307 CDS
T03616
Name
(GenBank) DNA polymerase III chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
tig
Thioploca ingrica
Pathway
tig03030
DNA replication
tig03430
Mismatch repair
tig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THII_1307
03430 Mismatch repair
THII_1307
03440 Homologous recombination
THII_1307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tig03032
]
THII_1307
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_1307
Enzymes [BR:
tig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THII_1307
DNA replication proteins [BR:
tig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THII_1307
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THII_1307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
BAP55604
UniProt:
A0A090AF15
LinkDB
All DBs
Position
1557551..1557985
Genome browser
AA seq
144 aa
AA seq
DB search
MPQIDFYILHTKARQERDRLACQLVDKAWHQGYRTYIHTHSLIQAKQLDDLLWTFKDTSF
LPHDIYPEVLSSTAPIRIGYTDQLCEKMEVLINLTATVPPFFALVKRIAEIVDDTPTARE
AGRDRYRCYQQTADNVLKVHEIYR
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaattgacttttacatcctacataccaaagccaggcaagaaagggatcgtctt
gcctgtcaattggttgacaaagcgtggcaccaaggttaccgtacttatattcacacccat
tctctcattcaagccaaacaactggatgatctgctctggacctttaaggataccagtttt
ttaccacatgatatttatccggaggtgttatcttcaactgcgccaatccggattggttat
actgaccagctctgtgaaaaaatggaagtattaattaatttaacggcaacagtacccccg
ttttttgcactggttaaacgcattgctgaaattgtcgatgataccccgactgcacgtgaa
gcaggtcgagaccgctatcgctgttatcaacaaacggcggataatgtactaaaagttcat
gaaatttatcgataa
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