Thioploca ingrica: THII_1331
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Entry
THII_1331 CDS
T03616
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tig
Thioploca ingrica
Pathway
tig03030
DNA replication
tig03430
Mismatch repair
tig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THII_1331
03430 Mismatch repair
THII_1331
03440 Homologous recombination
THII_1331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tig03032
]
THII_1331
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_1331
Enzymes [BR:
tig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THII_1331
DNA replication proteins [BR:
tig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THII_1331
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THII_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF7881_C
RAG1_imp_bd
Motif
Other DBs
NCBI-ProteinID:
BAP55628
UniProt:
A0A090ACV8
LinkDB
All DBs
Position
complement(1585077..1585790)
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AA seq
237 aa
AA seq
DB search
MRQIVLDTETTGLDPKEGHRIIEMGCVEMINRRITDRYYHQFLQPDRQIEVAASRVHGIT
HEFLRDKPRFANVVTELMAFIQGAELIIHNASFDVGFINHELQLLQQNWQPLSHYCSITD
TLTLARERHPGQKNSLDALCKRYNVDNSNRQLHGALLDARLLAEVYLAMTGGQVSLLSCQ
ETNQVNNEAAIKRVHSERPPLKVVIPTSMELQAHEQKLVVIEKMSGGKCLWQALEQS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaattgttttagatactgaaacgaccggtctcgatcccaaagaaggtcatcgt
attatcgaaatgggttgtgtcgaaatgatcaatcgacggattactgaccggtattatcat
caatttctccaaccggatcgtcaaattgaggttgccgctagtcgtgttcatgggattact
catgaatttcttcgagataagccacgctttgccaatgtagttactgaattgatggctttt
attcagggagcagaactcattattcacaatgcctcgtttgatgtgggctttattaatcat
gaattacaattacttcaacaaaattggcaaccgctttctcattattgctcaattacggat
accttaacattggctagagaacgccatcccgggcaaaaaaatagtttagatgcgttgtgt
aaacgttataacgtcgacaattctaatcggcagttacatggcgctttgctagatgctcga
ttattagctgaagtttacttagcgatgaccggtgggcaagtcagtttattatcttgccaa
gaaactaatcaagttaataatgaggctgcaattaaacgagttcattccgagcgaccgccc
ttgaaagtcgtaatacccacgtcaatggagttgcaagcccatgaacaaaagttagtggtt
attgagaaaatgagtggtgggaaatgtttgtggcaggctttggaacagagctaa
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