Thioploca ingrica: THII_1490
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Entry
THII_1490 CDS
T03616
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tig
Thioploca ingrica
Pathway
tig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THII_1490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tig03019
]
THII_1490
03110 Chaperones and folding catalysts [BR:
tig03110
]
THII_1490
03029 Mitochondrial biogenesis [BR:
tig03029
]
THII_1490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tig04147
]
THII_1490
Enzymes [BR:
tig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
THII_1490
Messenger RNA biogenesis [BR:
tig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
THII_1490
Chaperones and folding catalysts [BR:
tig03110
]
Heat shock proteins
HSP60 / Chaperonin
THII_1490
Mitochondrial biogenesis [BR:
tig03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
THII_1490
Exosome [BR:
tig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THII_1490
Exosomal proteins of other body fluids (saliva and urine)
THII_1490
Exosomal proteins of breast cancer cells
THII_1490
Exosomal proteins of colorectal cancer cells
THII_1490
Exosomal proteins of bladder cancer cells
THII_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAP55787
UniProt:
A0A090AJR6
LinkDB
All DBs
Position
1780979..1782607
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVRFSDEARQQMMRGVNILANAVKITLGPKGRNVVLEKSFGSPTVTKDGVSVAKEI
ELENKFENMGAQMVKEVASRTSDTAGDGTTTATVLAQSILTEGMKSVAAGMNPMDLKRGI
DKAVIVAVEELKKLSKPCTDDKAIAQVGTISANADEVIGDIIAKAMNKVGKEGVITVEEG
SGLDNELDVVEGMQFDRGYLSPYFVNNQQTMTAELENPLILLHDKKISNIREMLPILEGA
AKAGRSLLIVAEDVEGEALATLVVNTIRGVVKVAAVKAPGFGDRRKAMLQDIAILSGGTV
ISEEVGLSLEKAGLDDLGHAKRITISKENTTIIDGAGKTSEIEARVKQIRAQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALKAIQGLKGVNRDQDTGIKIALRAMEEPLRQIVANSGQEPSVILNKVAEGQGNFGYNA
ATEEFGDMVAMGILDPTKVTRSALQNAASIAGLMITTEAMVAELPKREEHSHGPAGGGMD
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagaagtacgtttttcagatgaagcacggcaacagatgatgagaggggtg
aatatcctcgctaatgcggtaaaaatcaccttaggtcccaaaggtcggaatgtcgtttta
gaaaaatctttcggttcacccacggtgactaaagatggggtttcggtcgcgaaagaaatc
gaattagaaaataaatttgaaaacatgggtgctcaaatggttaaagaagtcgcttcacgg
acttccgataccgccggtgatggaacaactaccgccaccgttttagcacaatctattcta
accgaaggaatgaagtcggtagccgccgggatgaatcctatggatttaaaacggggcatt
gataaagccgttatagtcgcggtagaagaattaaagaagttatctaagccgtgtactgat
gataaagccattgctcaagtgggaaccatttcagctaatgccgatgaagtcattggtgac
atcattgctaaagccatgaataaagtgggcaaagaaggtgttattaccgttgaagaaggc
tctggcttagacaatgaactcgatgtggttgaagggatgcaatttgatcgcggctatcta
tcgccttactttgttaataatcaacaaactatgacggcagaattagaaaatccgctgatt
ctgttacatgataagaagatttctaacattcgggaaatgttaccgattttagaaggtgcc
gctaaagccggtcggtcactgttgattgtcgctgaagatgttgaaggggaagccttagca
acgttggtagtcaacactattcgtggtgtcgttaaagtcgctgcggttaaggcacctggt
tttggggatcgccgtaaagccatgttgcaagacattgccattttaagcggtggtaccgtc
atttctgaagaagtcggtctaagcttggaaaaagccggtttagatgatttaggtcatgcc
aaacggattaccatcagcaaggaaaacacgactatcattgatggtgctggtaaaacgtca
gagattgaagcccgtgttaagcaaattcgtgctcaaattgaagaagctacttcggactac
gacaaagagaaattacaagaacgggtagctaaattagccggtggagtagccgtcattaaa
gtcggtgccgctaccgaagtcgaaatgaaagaaaagaaagcccgtgtagaagacgcacta
catgcaacccgtgccgcagtagaagaaggtgttgtacccggtggtggtgttgctttagtt
cgtgctcttaaagccattcaaggtttaaagggcgttaaccgcgatcaagataccggtatt
aagattgcgttacgtgcgatggaagaaccgctccgtcaaattgtggcgaattcgggacaa
gaaccctcagttatcttaaataaagtggctgaaggtcaaggtaacttcggttacaacgca
gccaccgaagaatttggtgatatggtcgccatgggtatcttagatcccaccaaagttact
cgttctgcgttacaaaatgcagcttctatcgctggtttaatgattaccactgaagcgatg
gttgctgaacttcccaaaagagaagaacatagtcatggacccgccggcggcggcatggac
atgatgtaa
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