Thioploca ingrica: THII_1531
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Entry
THII_1531 CDS
T03616
Name
(GenBank) holliday junction DNA helicase, RuvB subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tig
Thioploca ingrica
Pathway
tig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THII_1531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_1531
Enzymes [BR:
tig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THII_1531
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THII_1531
RecFOR pathway proteins
THII_1531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
nSTAND3
AAA_3
AAA_14
Mg_chelatase
AAA_16
Rad17
AAA_2
TIP49
Bac_DnaA
NTPase_1
ABC_tran
RNA_helicase
TniB
NB-ARC
AAA_24
AAA_18
NPHP3_N
NACHT
AAA_17
AAA_28
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
BAP55828
UniProt:
A0A090ADC4
LinkDB
All DBs
Position
complement(1844337..1845371)
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AA seq
344 aa
AA seq
DB search
MTVEIERLISSTHDVEDQAIDRAIRPRRLIDYAGQTRVREQMEIFIPAAKFRGEALDHLL
IFGPPGLGKTTLAHIIAHEMEVNIRQTSGPVLERPGDLAALLTHLEPHDVLFIDEIHRLS
PVVEEILYPAMEDFQLDIIIGEGPAARSIKLDLPPFTLIGATTRAGLLTSPLRDRFGITQ
RLEFYNNQDLAAIITRSAHILNVPLDSAGALELAQRSRGTPRIANRLLRRVRDYAQIRAN
GQITLEVARKALDLLNVDNYGLDMMDRKLLLAIMEKFAGGPVGIDSLAAVLGEEKGTIED
VIEPFLLQQGLLMRTSRGRMVTKLAWQHFGLNPTGSLDLFTTEK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttgaaatcgaacgccttattagctccacccatgatgttgaagatcaagctata
gatagagctattcgtcctcgacgtttaattgattatgccggtcaaactcgggttcgcgaa
caaatggaaatttttattccggcggctaaattcagaggtgaagcactggatcatttatta
atttttggccccccgggtttaggtaaaacgacgctagcacatattattgctcatgaaatg
gaggtcaatattcgccaaacctcgggaccggttttggagcgtcctggcgatttggctgcg
ttgttaactcatttagaaccacatgacgttttatttattgatgaaattcatcggttaagc
cccgtagtcgaagaaattttatatccggcgatggaagattttcaactcgatattattatt
ggggaaggtccggctgctcgttcgattaagttagatttaccaccgtttactctaattggt
gccacgactcgagcgggattactcacttcccctttacgtgatcggtttggtattactcaa
cgactggaattttataataatcaagacttagcggctattattactcgctctgcccatatt
ttaaatgttcccctggactccgccggggctttagaattggcacagcgttcccgaggcacg
cctcgaattgctaatcgcttactacgacgggtacgagactatgctcaaattcgtgctaac
ggtcaaattaccttagaagtggcacgaaaggcattagacttgcttaatgtggataattat
gggctcgatatgatggatagaaaattattactcgcgattatggaaaaatttgctggtggc
cccgttggaattgacagtttagctgctgttcttggcgaagaaaaaggcaccatagaagat
gtcattgagccatttttactccaacaaggtttattaatgcgaacttcaaggggacgtatg
gtaacgaaattagcttggcaacattttggtcttaaccccaccggttcattagatttattt
accactgaaaaataa
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