Thioploca ingrica: THII_1543
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Entry
THII_1543 CDS
T03616
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tig03009
]
THII_1543
Enzymes [BR:
tig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
THII_1543
Ribosome biogenesis [BR:
tig03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THII_1543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF7676
Motif
Other DBs
NCBI-ProteinID:
BAP55840
UniProt:
A0A090AL99
LinkDB
All DBs
Position
complement(1861572..1862498)
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AA seq
308 aa
AA seq
DB search
MAGYRLDKALAELFPTYSRARLQQWLSEGQVLIDTTPRRRGKEKVQGGEKVQLTAQLEEQ
VTWQAQSLPLNLLYEDEAILVVNKPAGVVVHPGAGNPDETLVNALLHYAPELAQLPRAGI
IHRLDKDTSGILAIARSLPAHTHLVAQLQQHQFKREYQAVVTGVFVAGGTIDAPIGRHPT
HRTQMAVVTQGKPAVTHYRIIQRYRAHTHIRVQLETGRTHQIRVHMAYQRYPLVGDKAYG
GRLHFPAGSSESLKQTLRTFPRQALHAETLGLVHPHSGQWLQWTVPLPPDMQNLLMELEQ
DKINQNAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccgggtaccgtctcgataaagccttggcagagttatttcccacttattctcgggcg
cggttgcaacagtggcttagtgaagggcaggtattgattgatacgacgccgcgccgacgt
ggtaaagagaaagtgcaaggcggtgaaaaagtacaactcacggctcagcttgaggaacaa
gtgacttggcaagcacaatctctgccgctgaatttgctgtatgaagatgaagccattctc
gtggtcaataaacccgctggtgtggtagtacatcctggtgccggtaatccggatgaaact
ttagttaatgcgttactccattatgccccagaattggcgcaattaccgcgagccggaatt
attcaccgcttagataaagataccagtggtattctagctattgctcggtcgttaccggca
catacccatttagtggcacaattacaacagcatcaatttaaacgcgaatatcaagcggtc
gttaccggcgtattcgttgcgggtggaacgatagatgcccccatcggacgccatccaacg
catcgtacccagatggccgtcgtcactcagggtaaaccggcggtgactcactatcgaatc
atccaacgttaccgtgcgcatacccatattcgagttcaattagaaaccggtcgtactcac
caaatccgagtccacatggcttatcagcgttatccattagtgggtgataaagcctatggg
gggcgattacattttcccgccggcagcagtgaatcattaaaacaaaccttacgcactttt
ccaagacaagctttacatgctgaaaccctcggtctcgtgcatcctcacagtggtcagtgg
ctgcaatggactgtgcctttaccacccgatatgcaaaatttattgatggaactggaacag
gataaaattaaccagaatgccgattag
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