Thioploca ingrica: THII_1564
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Entry
THII_1564 CDS
T03616
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tig
Thioploca ingrica
Pathway
tig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THII_1564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tig03019
]
THII_1564
Enzymes [BR:
tig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
THII_1564
Messenger RNA biogenesis [BR:
tig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
THII_1564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BAP55861
UniProt:
A0A090BUX4
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All DBs
Position
complement(1888160..1889581)
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AA seq
473 aa
AA seq
DB search
MTSHSSLTSGLLSTVLKISTNFLPQYPQINLPVQEDSIKQRPIRIPRPEHTLSRRHISQS
ALTVLYQLRHAGYQAFLVGGGVRDVLLGRIPKDFDVVTNALPEEIKKLFRSCRLIGRRFL
LAHVRLNKDIVEVATFRAHHDKGGDGVMEEGRILRDNVYGTIDEDAWRRDFTINALYYDI
SDFSLLDYANGMADLRAGIIRVIGNPQRRYEEDPVRMLRAVRFAAKLGFTIAPTTATPIQ
QLGGLLANIPPARLLEEVQKLFLSGYAVQAFIQLREYNLFKQLFPYTDECLEDAQTLALI
KQVLHNTDERLKDNKPVAPAFLLAALLWPPLSRSLPAQAAGKNTYSTEMLLKASQSLLVK
QHKRVAIPRRIVVLMQEIWSLQQRLVRPVRGKRYLNLLEHPRFRASYDFLLLRAQAGEEE
AKPFAQWWTQFINSDEQQRQALLSQYPATGSKQPRRRRSNKKKIIIKVEIESE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgacaagtcatagctcactcacgagtggtttgttatcaacagtactaaaaatatctacc
aactttttaccacaatatcctcaaattaacttgccagtgcaggaagactctatcaaacag
agacctatccgtattccacgtccggaacatactttgtcgcgtcgccacatcagccaatcg
gcactgactgtgttgtatcagttacgtcatgcgggctaccaagcatttttagtcggtggt
ggtgttcgagatgtattattaggacggattcccaaagattttgatgtcgtaaccaatgcc
ttacccgaggaaataaaaaaattatttcggagttgtcgactgattggcagacggttttta
ttggcgcatgttcgtttaaataaagatatcgtcgaagtggccaccttccgtgctcatcac
gataaaggcggagatggcgtgatggaagaagggcgaattttacgcgataacgtttatggg
accatagacgaagatgcgtggcgacgtgattttactatcaatgcactctattacgatatt
agtgatttttctttgttagactatgccaatggtatggctgatctgcgcgccggtattatt
cgggtgatcggtaatccacaacgtcgctacgaagaagatccggtgagaatgttacgcgca
gtcagattcgcagctaaattgggctttaccatagcaccgactacggccacacccattcag
caattaggtggcttattggctaatattccgccagcgcgactattggaagaagtacaaaag
ctatttttaagtgggtatgccgtccaagcctttatccaattacgcgaatataatttattc
aagcaattatttccttatacggatgaatgtcttgaggatgcccaaaccttggctttaata
aaacaggtattacataataccgacgagcgactcaaagacaataaaccggttgccccagcc
tttttgttagcggctttattatggccacctttatcacgatccttaccggcacaagccgct
ggcaaaaacacttactcaacggaaatgctactaaaagcgagccaaagtttactcgttaaa
caacataagcgagttgctatccccagacggattgtcgtgttgatgcaagaaatttggtca
ttacaacagcggctggtccgaccggttcgagggaaaagatacttaaatttgctagaacat
cctcggtttcgagccagttatgattttctgttattacgtgcgcaagctggcgaagaagaa
gctaaaccgtttgctcaatggtggactcaatttattaatagcgatgagcagcaacgtcag
gctttgttatctcaatatccagccactggttctaagcaaccgcggcgacgccgaagtaat
aaaaagaaaataatcatcaaagttgagatcgaaagtgaatga
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