Thioploca ingrica: THII_1804
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Entry
THII_1804 CDS
T03616
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tig
Thioploca ingrica
Pathway
tig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THII_1804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_1804
Enzymes [BR:
tig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THII_1804
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THII_1804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
nSTAND3
TFA2_Winged_2
AAA_19
TrwB_AAD_bind
AAA_11
Viral_helicase1
DnaI_N
Motif
Other DBs
NCBI-ProteinID:
BAP56101
UniProt:
A0A090BV22
LinkDB
All DBs
Position
2165271..2167469
Genome browser
AA seq
732 aa
AA seq
DB search
MILQIAIPKPVYTHFDYLPPPGIEMSRLQPGIRLRVPFGKNQSDIGILLAIAENSAIASH
KLKFAEVILDNTPILPPDILQLLQWASDYYHHPIGEVISTALPTLLNQGHPAIIQTMQGW
KLTASGQEQLASLAKTAHRQQAVLQLLQEHPHGLSHVTLSNSLSNIVPVLRTLEKKNWIT
PHLVEPTHLVKAVQSISLPLPLNAAQTQAVNRVCQHLNRFYPCLLDGVTGSGKTEVYLQI
IQQVLNQNRQALVLIPEINLTPQMVNRFQQRFSVPLAIFHSKLTPHERLQAWLLAKEGIA
PIVIGTRSAVWTPLARPGLFIVDEEHDPAYKQQDGFRYSARDMAVVRAQRAQVPILLGSA
TPSLDSLYNAQQQRYQHLILPERAGTAVHPRFQVVDMRPQSRQSLSWQLVQAITLRLAKQ
QQVLLFINRRGYAPTLMCYHCGWVAYCQHCDAPLTYHQTNQNLCCHYCGATRLRDTRCPD
CHQEQLFLLGQGTQRIEEQLQQQFSQARILRIDSDSTRGKNAMHTLLEHIHGGEVDILVG
TQMLAKGHHFPKVTLVGVINIDSGLYNADFRAPERMAQLLVQVAGRAGRAEEPGEVIIQT
YHPDHPLLNCLIREGYPAFAQVALQERQLAQFPPYTRLALLRAEANQVELPLQFLQAAKE
QALQLTAQEVQLWGPVPAPMARRAGWYRAQLLLQSTQREVLHRLLSQWLPCLASLAGRKV
RWSLDIDPQELL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatcctacaaattgctattcctaagccagtttatactcattttgactacctgccacca
cccggaatcgaaatgagccgcttacaacccggcatacggttacgggtaccctttggaaaa
aatcaaagtgatataggaatacttctggcgattgcagaaaatagcgccattgcaagtcat
aagcttaaatttgccgaagtcattcttgataatacgcccattttaccccccgatatcttg
cagttattgcagtgggcaagcgactattatcatcatccgattggtgaggtcatctcaacc
gctttacctacgctattaaatcagggacatccggcgattattcaaaccatgcaaggttgg
aaactgaccgccagtggacaagaacagttagctagcctagccaaaacggctcaccgacaa
caagcggttttacagttattacaagaacatccccatggcttgagtcatgtcactttaagc
aacagtttatctaatatcgttccggtattgcgaaccttggaaaagaagaattggataacg
cctcatctggttgaacccactcatctggtcaaagcagttcaatcgatttctttaccatta
ccattgaatgctgcccaaactcaagcggttaatcgagtttgtcagcatctcaatcgtttt
tatccctgtttattagatggcgtcaccggcagcggcaaaaccgaagtctatttacaaatt
attcaacaagttctgaaccaaaatcgtcaagctttagtgttaattccggaaatcaattta
accccacaaatggttaatcgatttcagcaacgtttttcagtccctttagcgatatttcat
tctaaactcactccacatgagcgcctacaagcttggctactcgcaaaagaaggcattgct
cccattgtgataggaacgcgttcggctgtctggacaccgttagcgcgtccaggtttattt
atcgtggatgaagaacatgatcccgcttacaaacaacaagatggattccgttactcggca
cgcgatatggccgtagtacgggcacaacgtgctcaagtgcccattttgttagggagtgct
accccgtctttggatagtttatacaatgcgcaacaacagcgttatcaacatttaattttg
cccgaacgcgctggtaccgcagtgcatccccgttttcaggtggttgatatgcgcccacag
tcacgccaaagcctgtcatggcaactggtgcaagccattacccttcgcctcgccaaacaa
caacaagtattgttatttattaaccgacgaggttatgctcccaccttgatgtgttatcac
tgcggttgggtagcgtattgtcaacattgcgatgctccactcacctatcaccaaactaat
cagaatctttgttgtcattattgtggagccactcgattacgagatacgcgttgtccggat
tgccatcaagaacaattgtttttattaggacaaggcactcaacgaattgaagaacaatta
caacaacaattttcccaagctcggattttgcgcatagacagtgatagtacccggggtaag
aatgccatgcacactttactagaacacattcatggtggtgaagtggatattttggtagga
acgcaaatgctggcgaaagggcatcactttcctaaagtgactttagtgggcgttattaat
atcgatagtggtttatacaatgccgattttcgcgcgccggaacgcatggcccaattatta
gttcaagtggctggacgtgccggtcgtgctgaggaaccgggggaagtcatcattcaaact
tatcatccggatcatcccttactgaactgcttaattcgagaaggttatccggctttcgcg
caagtggctttacaagaacgccaactagcacaatttccaccttacacccgcttagcattg
ctccgtgcggaagctaatcaagtcgagttgcctttgcaatttcttcaagccgctaaagaa
caagctttacaattaacggctcaggaagttcaactctggggacccgttcccgcaccgatg
gctagaagagctggctggtatcgcgcgcaattattactgcaatcgactcaacgtgaagtt
ttacatcgattactttcccaatggttaccttgcttggctagtttagccggtagaaaagtg
cgctggtcattggatattgatccacaagaattattataa
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