Thioploca ingrica: THII_1915
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Entry
THII_1915 CDS
T03616
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_1915
Enzymes [BR:
tig01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THII_1915
DNA repair and recombination proteins [BR:
tig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THII_1915
Prokaryotic type
THII_1915
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAP56212
UniProt:
A0A090AKM8
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All DBs
Position
complement(2295396..2296799)
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AA seq
467 aa
AA seq
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MSHAIVWFRRDLRLQDNPALHHAVAQGYQVIPVYIYAPEEETPWPSGRASRWWLHHSLQA
LDMALRAKNSRLLFFQGCSLPILQKLVESTRTKAIYWNRLSEPAIITRDKTIKTALRSQG
ITVQSFKADLLHEPGTIHTQAGKPYQLFTPFWRTCQRSLLTELPLTAPPIFTAPQPWPPS
FNLADLKLLAALSTNEFAQFWQPGETGAWQQLQQWCSGPISHYAEQRDFPGIDGVSRLSP
HLHFGEISPRQVLGAVEYALHHLNGRVRGVQNYERQLFWREFAYYLLYHYPYTPEQPLRP
VFKKFPWRTDYQKLLKAWQQGQTGYPLVDAGMRELLTTGWMHNRVRMVTASFLTKNCAIP
WQEGAYWFWEHLVDADLANNTLGWQWVAGCGADAVPYYRIFNPLLQSTHFDPQGDYLQRW
LPELADLPPQYRHRPWLAQPQPDYPTPIIDYMQSRREALGAYQHLKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgctatcgtttggtttcgtcgtgatttacggttacaagataatccggcatta
catcatgctgtggctcaaggatatcaagttattccggtttatatttatgcaccggaagag
gaaaccccttggccaagcggacgtgctagccgctggtggttacatcacagtttacaagcg
cttgatatggccctgcgggctaaaaattcacgactcttattttttcaagggtgtagttta
ccgattttgcaaaagctggttgaatccactcgaactaaagctatctactggaaccgttta
tctgaacccgcgattatcactcgtgataaaacgattaaaacggctttacgctcccaaggc
attacggtgcaaagttttaaagccgatttattacacgaacctgggactattcacactcaa
gcgggcaaaccctatcaattatttacccctttttggcgaacttgccaacgttccctgctg
acagaattaccgttaaccgctcctcctatttttacggcgcctcaaccatggccccccagt
tttaatttagctgatttaaaattattagcggcgctaagtactaacgaatttgcccaattt
tggcaacccggtgaaactggagcatggcaacagctacaacaatggtgtagtggtcccatt
agtcattatgccgaacaacgagattttcctggaatagatggcgtatctcgcttatcgccg
catttacattttggcgaaatatcaccacggcaagttttaggggcagtcgaatatgcttta
catcatcttaatggtcgtgttcgaggggtacaaaattatgaacgtcaacttttttggcgc
gaatttgcttattacttgctctatcactatccctataccccagaacaacccttgcggccg
gtatttaaaaaatttccgtggcggactgattatcaaaagctattaaaagcttggcaacaa
ggacaaaccggttatccactcgtggatgccgggatgcgggaattattaacgaccgggtgg
atgcacaatcgagtacgaatggtaacagcttcttttttaactaaaaactgtgcaattcct
tggcaagaaggcgcttattggttttgggaacatctggtggatgcggatttagccaataat
accctgggatggcaatgggttgccggttgtggtgctgatgccgtaccttattatcgaatt
ttcaatccgttattacaaagcactcactttgatccccaaggagattatttgcaacgttgg
ctgccagaattagccgatttaccaccacaatatcgacatagaccttggcttgctcaacct
caacccgattatccgacaccgattattgattacatgcaatcacgtcgtgaagccttgggt
gcttatcaacatcttaaaaaataa
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