Thioploca ingrica: THII_1978
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Entry
THII_1978 CDS
T03616
Name
(GenBank) type II secretory protein GspE
KO
K02652
type IV pilus assembly protein PilB
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tig02044
]
THII_1978
02035 Bacterial motility proteins [BR:
tig02035
]
THII_1978
Secretion system [BR:
tig02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
THII_1978
Bacterial motility proteins [BR:
tig02035
]
Pilus system
Pilus assembly proteins
THII_1978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_16
AAA_22
HerA_C
PhoH
AAA_7
ATPase
AAA_19
AAA_11
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAP56275
UniProt:
A0A090AM58
LinkDB
All DBs
Position
2388056..2389774
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AA seq
572 aa
AA seq
DB search
MAVLKPKIVLPGLARKLVAEGLLSEADAEQAFEKSLATHIPFASYVVSQKLASSRDVAIA
AAEEFGVPLVDIDSVNLNPETIKLIDQKLLEKHHALPIFSRGKRLFVAISDPTNIHALDE
IKFHTKMHTEAILAEEDKLEKAIERALEVFDTSMKGLNDEIGEIDLVDEEKSDKAEDDKN
EADEAPIVKFVNKMLLDAIKIGASDLHFEPYEKFYRVRFRVDGMLKVVSNPPVTLARKLA
ARIKVMSRLDVSERRVPQDGRIKLKLSANKSIDFRVSTCPILWGEKIVMRILDSSAAKLN
IDMLGYEEEQKRLYLEALANPYGMVLVTGPTGSGKTVSLYTGINILNKEGVNISTAEDPV
EINLPGVNQVQIDEKTGMTFSKALKAFLRQDPDIILVGEIRDLETGGIAIKAASTGHMVM
STLHTNDAPQTLTRMVDMGIPSFAIATCVNLIMAQRLCRRLCSCKVEQDIPEKTLLEEGF
KKEEIPNIKLYAPRLGGCEKCGGAGYKGRVGIYQVMPISEEMKRLIMEGSNAIGIADQAR
KEGIPDLRVSGLKKVKDGLTSLEEVNRVVNKE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcttaaaacctaaaattgtccttccagggctggcacgtaaattagtcgctgaa
ggactattaagtgaagcggatgcggaacaagcattcgagaaatcgttggcaacacacatt
ccctttgccagctatgtggtcagccaaaaactggctagcagtcgcgatgtggccattgct
gccgctgaagaatttggtgttcctttagttgacattgatagtgttaacctgaatcctgaa
acgatcaaattaatcgaccaaaagttattggaaaaacaccatgcgctacctatttttagc
cgtggtaagcgtctctttgtggctatttcggatccgaccaacatccatgccttagatgag
attaagtttcatactaaaatgcacaccgaagcaattttagcggaagaagataaattagaa
aaagcgatagagcgtgctttggaagtctttgataccagtatgaaaggtttgaatgatgaa
attggcgagattgatctggttgatgaagaaaaaagtgataaggctgaagacgacaagaat
gaagccgatgaagcgccgattgttaaatttgttaacaaaatgttgctggatgctatcaaa
ataggggcatctgatttacattttgaaccctacgagaaattttaccgagtacgctttcgc
gttgatggcatgctgaaagtggtttccaatccccccgttactctggctagaaaattagcc
gctcggattaaggtgatgtcacgcttagatgtttccgaacgacgagtgccacaagatgga
cggattaaactgaaactttctgctaataaatcgattgatttccgagtcagtacttgtcct
attttatggggcgagaaaatcgttatgcgcattttggattcttcggcggctaagctcaat
attgatatgctcggctatgaagaagagcaaaagcgtctttatctagaagcactggctaat
ccttatgggatggtcttagttaccggaccaaccgggagtggcaaaaccgtttctctctat
acaggcattaatattcttaacaaagaaggcgttaatatttcaaccgcagaagacccggtt
gaaattaatttacctggcgttaaccaagtacagattgatgagaaaaccgggatgactttt
tctaaagccttgaaagcttttctgcgacaagatcctgatattatcttagttggcgaaatt
cgtgatttagagacgggagggattgctatcaaagcggcttctaccggtcatatggtgatg
tccactttacataccaatgacgctcctcagactttaacgcgaatggttgatatgggcatt
ccctcgtttgcgatagcaacttgtgtcaacttaattatggcgcagcgtctttgccgtcgt
ttgtgtagttgtaaagtagaacaggatataccggaaaaaactttgttagaagaaggattt
aaaaaagaagaaataccgaacattaaactttatgctcctagactaggaggttgtgaaaaa
tgtggtggtgctggatataaaggtcgggtgggtatttatcaggtcatgccgatctctgag
gaaatgaagcgtctgattatggaaggtagcaatgcgattggcatagctgaccaagcccgt
aaggaaggtattccggatttacgggtgtccgggttgaaaaaagtcaaagatggcttaact
tcattagaagaagtcaatcgtgtggttaataaagagtag
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