Thioploca ingrica: THII_2430
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Entry
THII_2430 CDS
T03616
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tig03032
]
THII_2430
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_2430
Enzymes [BR:
tig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
THII_2430
DNA replication proteins [BR:
tig03032
]
Prokaryotic type
DNA Topoisomerases
THII_2430
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THII_2430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAP56727
UniProt:
A0A090ALL9
LinkDB
All DBs
Position
2947884..2950205
Genome browser
AA seq
773 aa
AA seq
DB search
MNKNLVIVESPAKAKTLKKYLGKDFEVLASFGHVRDLLPKEGAVDPEHDFAMNYQLIERN
IKHVDAISKAMQQADALYLATDPDREGEAISWHLYEILKDKQMLHNKPVHRIVFHEITPT
AIQEAVAHPRVLSMELVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIV
EREEAIEKFQPQEYWTIIADCQQKSQRFTAKLTVWEGKKLTQFSISHLEQATEIKNTLIQ
LAHGELLVAKVDKKQRKRQPSAPFTTSTLQQEAARKLGFTTKQTMQIAQQLYEGIDTGQG
AVGLITYMRTDSVNLAQEALAEIRAMIEERYGQENIPKQPRQYKTKAKNAQEAHEAIRPT
AAKCHPDELGAYLTREQLKLYTLIWQRTIACQMIDALLDTVAVDFNCGENHQFRATGSTV
VNPGFMVVYQESVDDQKIGEEDEKMLPLFQVGDRVKLKEIKADQHFTEPPPRFSEASLVK
SLEEYGIGRPSTYATIISTLQQREYVKLEKKRFIATDIGRIVNKFLTEHFNQYVDYDFTA
RLEDELDGVARGEQQWIPLMERFWSKFKQLVDEKTQTVQRKDVTQEILTETCPQCESLLT
IRLGKRGRFIGCSAYPKCDYTRNLENENSETTTSSTATTEKVEGRSCPTCGSELHIKQGR
YNKFIGCSNYPHCKFTESLEKPVDSGITCPACQQGTLVKKKSRYGTFFYSCSGYPQCKYA
IPNEPVAESCPQCHWPILMLKTTKRRGTEKVCPQKDCDYAEQIVTEEVGCSEN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaatttagttattgttgaatcgccggctaaagccaaaacactcaaaaaatac
ttaggtaaagattttgaagtattggcttcttttggtcatgtacgtgatttacttcccaaa
gaaggagccgttgatcccgaacatgattttgctatgaattatcaattgattgaaagaaat
attaagcatgttgatgccattagtaaagccatgcagcaggctgatgccttatatttagcc
accgacccggatagggaaggtgaagcgatttcttggcatttgtatgaaattctgaaagat
aagcaaatgttgcataataaacccgttcatcgcattgtgtttcatgaaatcacgccgacc
gctattcaggaagcagtagcacatccacgtgtgttatcaatggaattggttaatgcccaa
caagctcgccgagccttggactacttagtcggatttaatttatcgccgctgttgtggaaa
aagattcggcggggtttgtccgccggccgggtgcaaagtccagccttgcgtttaattgtc
gaacgggaagaagccattgaaaaatttcaaccgcaagaatactggactattatcgccgat
tgtcaacaaaaatcacaacggtttactgccaaattaacggtctgggaaggtaaaaaacta
acccaatttagtatcagtcacttagaacaagcgactgagattaaaaatactttaattcaa
ttggctcatggagaattgctggtcgccaaagttgacaaaaaacaacggaaacgccaacct
tctgctccctttacgacttcgacgttacaacaagaagccgctcgtaaactcggttttacc
accaaacaaacgatgcaaattgcgcaacaactgtatgaaggcattgataccggtcaaggt
gcagtcggcttaattacttacatgcgcaccgattcagttaatttagctcaggaagcttta
gccgaaatccgggcgatgattgaagaacgttatggtcaagaaaatattcctaagcaaccg
cgccaatataaaaccaaagctaaaaacgctcaagaagcccatgaagccattcgacccacg
gcagcaaaatgccatcctgacgaattaggtgcttatttgacgcgcgagcaactcaaatta
tatacccttatttggcaacgaacgattgcttgtcaaatgattgatgcccttctcgatacg
gtagccgttgatttcaattgcggtgagaaccatcaatttcgtgccaccggttcaacggta
gttaatcccggtttcatggtggtttatcaagaaagcgtcgatgatcaaaaaatcggagaa
gaagacgaaaaaatgttaccgctattccaagtcggtgatcgagtaaaactgaaagaaatt
aaagcagatcaacattttactgaaccgcccccccgtttctctgaagcgagtttggtaaaa
agcttagaagaatatggtattgggcgcccgtctacttatgccacgattatttctaccctg
cagcaacgtgaatatgtgaaattagaaaaaaagcggtttattgcgaccgacattgggcgt
atcgtcaacaaatttttaactgaacactttaaccaatacgtcgattatgattttacggct
cgactggaagatgagttagatggcgtagcgcggggtgagcaacagtggattcctttgatg
gaacggttttggtctaaattcaaacagcttgttgacgaaaaaactcaaacggtgcaacgc
aaagatgttacgcaagaaatattaactgaaacctgtcctcaatgtgagagtttgttaacg
attcgcttaggtaaacgcggacgttttattggttgctcagcttacccgaaatgtgattac
actcgtaatttagaaaatgaaaattcagaaacaacgacttcttctactgccaccaccgaa
aaagtagagggacgttcctgtcctacctgtggttcagaattgcatattaaacaaggtcgt
tacaataaatttattggttgtagcaattatcctcactgtaagtttactgaatcgttggaa
aaaccagtggatagcggtataacttgcccggcgtgtcaacaagggactttagttaagaaa
aaatcacggtatggtactttcttttactcctgttctggttatcctcaatgtaaatacgcc
attcctaacgaaccggttgccgaaagttgtcctcagtgtcattggcccattttaatgtta
aaaaccactaagcgacgcggaactgaaaaagtttgtccacagaaagattgtgattatgct
gaacaaattgtcacggaagaagtcggctgttctgaaaattga
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