Thioploca ingrica: THII_2646
Help
Entry
THII_2646 CDS
T03616
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tig
Thioploca ingrica
Pathway
tig00061
Fatty acid biosynthesis
tig00071
Fatty acid degradation
tig01100
Metabolic pathways
tig01212
Fatty acid metabolism
tig02024
Quorum sensing
tig04146
Peroxisome
Module
tig_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
THII_2646
00071 Fatty acid degradation
THII_2646
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
THII_2646
09145 Cellular community - prokaryotes
02024 Quorum sensing
THII_2646
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tig01004
]
THII_2646
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tig04147
]
THII_2646
Enzymes [BR:
tig01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
THII_2646
Lipid biosynthesis proteins [BR:
tig01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
THII_2646
Exosome [BR:
tig04147
]
Exosomal proteins
Exosomal proteins of breast milk
THII_2646
Exosomal proteins of breast cancer cells
THII_2646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAP56943
UniProt:
A0A090AFN4
LinkDB
All DBs
Position
complement(3179877..3181682)
Genome browser
AA seq
601 aa
AA seq
DB search
MSANLITEQSVTTLPSLFRERVRCTPQHIAYRYFDKDNQIWQSITWTEMSDQVACWQLAF
AQENLKPGDRVAIMLRNSPQWVMFDQSALGLGLVTVPLYTDDRPDNVAYIIAEAEVKWLL
IEGANQWKRLHSVCKELTSLTRIVTVQNFEVKDLIDDRLITLTQWLSTDTAGSLQAQECP
PNELASIVYTSGTTGRPKGVMLSHRNLLSNAQALSQCTAFSSEDLFLSFLPLSHTLERTG
GYYLPMVIGATVAYARSIPQLALDLAQIKPTILISVPRIYEQVYVKIQSQLEKKPFFAKK
LFHLTVTVGWRRFEYRQKRVGWHPLLLLWPILRRLVADSVLEKLGGRMRLAISGGAALSP
IIAKVFISLGLNLLQGYGLTETSPVISVNLPDDNIPESIGTTIPGVTVKLGENDELLTTS
SCVMLGYWKNPEATQAVIDEAGWFHTGDKARQDEQGHLYITGRLKDIIVMGNGEKIPPAD
MEMSIGTDPLFAQVMIVGEGKAFLSALIVLNLEVWNELAIILKVDPQQRDSLQLKPVHQA
ILSRISQYIKDFPGYAQIRRVALFLEPWTIDNGLLTPTLKMKRARILEHHAAEIEQMYKG
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaacctcattactgaacaatcggtaacgactttgcccagtttatttcgtgaa
cgggttagatgtacaccccagcacattgcttatcgttattttgacaaagataatcaaatt
tggcaaagcataacgtggactgaaatgtcagaccaagtagcctgttggcaattggctttt
gcgcaagaaaacttaaaacctggtgatcgcgtcgccatcatgttacgcaatagtcctcaa
tgggtcatgtttgatcaatcggcattaggattaggattagtgacagttcccttatacacc
gatgatcgcccggataacgtcgcttatattatcgctgaagccgaagtgaaatggctcctt
atagaaggcgctaatcaatggaaacggttgcattccgtgtgtaaagaactaacttcactc
acacgcattgtaaccgtgcaaaattttgaggtaaaagatctgattgatgatcgtttaatc
actttaacgcaatggttatccacggataccgctgggtcattacaagcccaagaatgtcct
cctaatgaactcgctagtattgtttatacttccggaacgactgggcgccctaaaggtgtg
atgctcagtcatcgtaatttactcagtaatgcccaggctctttcccaatgtactgctttc
agcagcgaggatttatttttatcctttttaccactatctcatactttagaacgtaccggt
gggtactatctgccgatggtgattggtgcgacggtagcttatgcacgttctatcccgcaa
ttagctttggatctggcccaaataaaaccgaccattcttatttccgtgccccgaatttat
gaacaggtttatgtcaaaatccaaagtcaactcgaaaaaaaacctttcttcgctaaaaaa
ttatttcacttaaccgttaccgtgggttggcgccgctttgaatatcggcaaaaacgagtg
ggttggcatcccctgttactgttatggccaattttacgccgcttagtcgctgattcggtg
ttagaaaaactgggtggtagaatgcgcctagccattagcggcggtgccgctttatcaccg
attattgctaaagtatttatcagtttaggcttaaatttgttacaaggctatggcttgacc
gaaaccagtccagttatcagtgtcaaccttcctgatgataatattccagagagtattggt
accactatccccggcgtgaccgtgaaactgggtgaaaatgatgaactattaacgaccagt
tcgtgtgtcatgctgggatattggaaaaatccagaagcaactcaagcggttattgacgaa
gctggttggtttcatactggcgataaggcgcgccaagatgaacaaggacatttatacatt
accggtcgccttaaagacataattgtcatgggaaatggtgaaaaaatacccccggctgac
atggaaatgagcattggtactgatcccctctttgcccaagtgatgatagtgggtgaaggc
aaagcttttctcagtgcattaatcgtattaaatctagaagtttggaatgaactagccata
atattaaaggtcgatcctcaacaacgagattctttacagttaaaaccagttcatcaagct
attttgtcccggattagtcaatatatcaaagatttccctggttatgctcaaattcgccgt
gttgctctgtttctcgaaccgtggacgatagataatggcttattaaccccaactttaaaa
atgaaacgggcacgcatccttgagcatcacgctgccgagattgaacagatgtataaagga
ttttag
DBGET
integrated database retrieval system
