Thioploca ingrica: THII_2966
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Entry
THII_2966 CDS
T03616
Name
(GenBank) endonuclease/exonuclease/phosphatase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tig
Thioploca ingrica
Pathway
tig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THII_2966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_2966
Enzymes [BR:
tig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
THII_2966
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
THII_2966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAP57263
UniProt:
A0A090AGC5
LinkDB
All DBs
Position
complement(3540617..3541390)
Genome browser
AA seq
257 aa
AA seq
DB search
MRVITFNANGIRAAANKGFFTWLAQQHADIVGIQETKAQQNQLTDPLFYPSGYHCYYHDA
EKKGYSGVALYTRQPPQEVVKKLGESTLDKEGRYLEARFSTLNIVSLYLPSGTSGNERQQ
VKFQLMDYFMRHLIGLKQRSQEYILCGDWNIAHQPIDLKNWRGNQNHSGFLPEERAWMDH
LLGSAGFIDAFRIKNQEPEQYTWWSHRGQAWVNNTGWRIDYQIITPSLKDKVKNVHIYKE
QRFSDHAPLIIDYDYVF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtaattacttttaatgccaacggtattcgtgctgccgccaacaaagggtttttt
acttggttagctcaacaacatgctgacatcgttggtattcaagaaaccaaagcccaacaa
aatcaactaacggatccactcttttatccttccggttatcattgctattaccatgatgct
gaaaaaaaaggttatagcggagtggctttgtatactcgccaaccacctcaagaagtagtt
aagaaactgggtgaatcaactctagataaggaaggtcgctatcttgaagcccgttttagt
accctcaatattgtttctttatatctaccctctggcacttcgggtaatgagcgacaacaa
gtcaaatttcaattgatggattactttatgcggcatcttatcggactcaaacaacgttct
caagaatatattctttgtggcgattggaatatagctcatcaaccgattgatttaaaaaat
tggcgtgggaaccaaaatcattctggatttttaccagaggaacgcgcttggatggatcat
ttattgggctcagccggttttattgatgcctttcggataaaaaatcaagaaccagaacaa
tacacttggtggtctcaccggggacaagcttgggtaaacaacaccggttggcgaattgat
taccaaattattaccccaagtttaaaagataaggttaaaaatgttcatatttacaaagaa
caacgtttttcggatcatgctccgctaataatagattatgattatgtgttttaa
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