Thioploca ingrica: THII_2996
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Entry
THII_2996 CDS
T03616
Name
(GenBank) WD repeat-containing protein
Organism
tig
Thioploca ingrica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
Roc
Beta-prop_WDR90_POC16_2nd
Ras
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
DSE1_N
Beta-prop_WDR19_1st
ASA1
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_SCAP
NBCH_WD40
Beta-prop_VPS8
Beta-prop_NOL10_N
TIR_2
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
RMC1_N
Tricorn_2nd
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
SEFIR
TRM82_WD
PAC11
Beta-prop_HPS5
eIF2A
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_ELP1_1st
Arf
Beta-prop_RIG_1st
PD40
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Nucleoporin_N
MMR_HSR1
HGTP_anticodon
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
BAP57293
UniProt:
A0A090AGF7
LinkDB
All DBs
Position
complement(3578898..3582086)
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AA seq
1062 aa
AA seq
DB search
MTKDNLPFGFRLIYQLENHSETINCIEFSPNAKLLASASFDGFILLWDVMTGNLLQRLPI
TATYPRVIQFSPDSARLAVGCTDKTIQIWNVAGQLEHVLKNHTRNVNTLAWSPTGTTLAS
GADDGMIILWDTQHWQVRHTLSGHAQSVNSVAFSPTGDLLASGGDDKFIHLWQPETGVRQ
RRLKGHLGMVLSIAFSPQQPVLVSASSDKTIQLWDIQNGRPLRILEGHTDVVYKLAFSHD
GQVLASKSDDNTVRLWRGDATAPLAVLEETTEAQLWLGGLAFHPSQSLLATLGNRDRIIR
LWQLDIAQLLANQPQPHRVTKRLSHWLKKLWQPPISSPIPSDSVSFAEVPQLTPIVHYTT
AKIALVGDSGVGKTGLGWRLAQGHFQEQASTHGQQFWIIQELSGTRTDGTECEAVLWDLA
GQPDYRLVHALFLDDVDLALILFDPTHPQHPFKGVEYWLKQLHHKNKTGQTILVAARSDR
GTPTLTTEELEQFCQRQEITHGYVITSALAGEGLTTLTERIQQALHWDEMTATITTLTFR
RIKELVLQLKEARTNYEVILTPTALRTQLINTDPAWQFSDAELMTALQHLSHHGYVSILR
CSSGEAVILLVPDLLANLAASLVLEARRNDKGLGALEEARVLRGDYNLPELVSLRPPDRL
VLLDAALVLFLEHTICFRETIDDQIFLVFPGLINQKRPLTVQEPVLEDRSYTITGAIENI
YSALVVLLGYTNTFTRIQQWQNQVQYEVAQGQLCGIRKVEEHEGQLELILYYSQQTSLAT
QALFKNLLERFLRGREVAVTYYAPVICTICGYRQERSEVTKRLNTNKTFMFCGECGGKIN
LSQLEPELLLNDAQREILEREQSSAHGRTRFAKALVWVKSYLRDRLPQQPSPRCFISYAW
GVSEHERWVKKLAIDILDAGIEVILDDWDNSSLGSSVSRFISHIETANFIVVVGTPLFKE
KYLNKVSATGSVVAAEVDLITQRLIRTEEEKSTVLPLLLAGDDKISLPPLLRGRAYGDFR
EENFYFARLFELILTLYRIDFRDPAVRDLRDELRTEAQRHRY
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggataaccttccctttggttttcgcctgatttaccaattagagaaccattct
gaaaccattaactgtatcgaattttcaccgaatgcgaaattactcgcttcggcttctttt
gacggctttattttactctgggatgtgatgaccggtaatttattacaacgtctacctatc
accgccacttatccgcgagttattcaattttccccagatagcgctcgattggcagtggga
tgtaccgataagaccattcaaatatggaacgtcgccggtcagttagaacacgtcctgaaa
aatcatacgcgcaatgtcaatacgctcgcttggtcaccaacgggaactaccttagcttct
ggggcagatgacgggatgattatcctgtgggatacccagcactggcaagtacgtcatacc
ttaagtggacatgctcaaagtgtcaatagcgtggctttttctccgacgggcgatttatta
gcttcgggtggtgatgataaattcattcacttatggcaacccgagaccggcgtaagacaa
cgtcgcttaaagggacatctgggaatggtattgagcattgccttctcacctcagcaaccg
gtgttagtgtcagcgtcgagtgataaaactattcagctttgggatattcagaatggacga
ccgctacgaatattagaaggtcacactgatgtcgtttataagctagctttttctcatgat
ggtcaggtgttagcgtctaaaagtgatgataacacggtacgcttatggcgtggtgatgcg
actgcaccgctggctgttcttgaagaaacgaccgaagcacaactttggttaggtgggtta
gcttttcatccttcgcaatccttattggcaacgctgggtaaccgcgatcggataattcga
ttatggcaactggatattgcccaattgttagcgaatcagccacaaccccaccgtgtgact
aagcgtttatctcattggttaaaaaaactttggcaaccgcccatttcatctccaattcca
tcagactcggtgtcttttgctgaagtaccccaattaacacccatagttcactacactact
gccaaaatagccttggtcggtgacagtggcgtaggtaaaaccggtttgggttggcgtcta
gcacagggtcacttccaagaacaagcttcaactcacgggcaacaattttggattattcaa
gaattaagtggaactcgaaccgatggaactgaatgtgaagccgtattatgggatttagcc
ggacaaccggattatcgcttagttcatgcgctatttttagatgatgtcgatttagccctg
attttatttgatcctactcacccgcaacatccttttaaaggcgtagaatattggttaaag
cagcttcaccataaaaataaaacgggtcaaacgattttagttgccgctcgcagcgatcgg
ggaaccccaacgctgactaccgaggaattagaacagttttgtcaacgtcaagagataact
catggctacgtcataacgagtgctttagctggcgagggtttgaccactttaacagagcgg
attcaacaagccctgcattgggacgagatgacagctactatcacgacgttaacttttcgg
cggattaaagaattagttttgcaactcaaagaagcacgaacgaattatgaagtcattttg
acaccgacggcactccgtactcagttaatcaatactgatcccgcctggcaattcagcgat
gccgaattaatgacggcgctacaacatctttctcatcatggttatgtcagtatcttacgt
tgctcctcgggagaagcggttattttactggtaccggatttactggctaatttagccgct
tcactggttttagaggcacggcgtaacgacaaagggctgggtgccttagaagaagcgcgg
gtgttgcgaggcgattataatttgccggagttagtttcattgcgaccaccagatcgactg
gttctattggatgccgctttagtcttatttttagaacacaccatttgttttcgcgaaacc
attgatgatcaaatttttctggtatttccggggttaattaaccaaaagcgtccgctcact
gttcaagaacccgtcttggaagataggtcttacaccattaccggcgccattgaaaatatc
tattcagcattagttgtgctactcggctataccaatacctttacacgaattcaacaatgg
caaaatcaagtgcaatacgaagttgcccagggacaattatgtggtatccgcaaagttgaa
gaacatgaaggtcaattagaattaatcctgtactacagtcagcagacttctttggcaacc
caagcgttatttaaaaatctcttagaacgtttcttacgtgggcgcgaagtagcagtgacc
tactatgcgcccgtcatttgtaccatttgtggttatcgacaagaacgcagtgaagtaacc
aaacgtcttaatactaataaaacttttatgttctgtggcgaatgtggtggtaagattaat
ttatctcagttggaaccagaattgttacttaatgatgcccaacgggaaatcttagaacgg
gaacaatcgtctgctcatggacgcacgcggtttgctaaagctttagtttgggtaaaaagt
tatttacgagatcggttgccgcaacaaccttccccacgttgttttatcagttatgcttgg
ggagtttcagaacatgaacgctgggtaaaaaaactggcaatcgatattcttgatgcgggc
attgaagtgattttagatgattgggataattcctcattaggttctagcgtatctcgtttt
attagtcacatcgaaacggcgaattttattgtggtagtaggaacgccgctgtttaaggaa
aagtatcttaataaggtgtctgctaccggtagcgtcgtggcggcggaagtcgatttaatt
acgcaacgtttaattagaaccgaagaggaaaaaagcacggtgttaccgttgttgttagcc
ggtgatgataagatttctttgccacctttattacgtggacgtgcttatggtgatttccgt
gaggagaatttttattttgctcgcttgtttgagctgatcttaactttatatcgaattgat
tttcgggatccagcggtgcgagatttacgtgacgaattacgtactgaggcgcagaggcat
cgttattaa
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