Thioploca ingrica: THII_3112
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Entry
THII_3112 CDS
T03616
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K02005
HlyD family secretion protein
Organism
tig
Thioploca ingrica
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
THII_3112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
BSH_RND
HH_MFP_RND
Beta-barrel_YknX
BSH_CusB
Beta-barrel_AprE
BSH_YknX
Beta-barrel_RND
Biotin_lipoyl
Tropomyosin
Motif
Other DBs
NCBI-ProteinID:
BAP57409
UniProt:
A0A090AJ23
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Position
3751359..3752636
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AA seq
425 aa
AA seq
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MDKTALDNSFEQVVLQRSTPFYKRFWFWILLLTLGILATVSGILRPDGNSTLPRFKTAPV
ERGNLIVTVTATGTLQPVKQVIVGTEVSGTVKSVAVDYNDPVKAGQVLAMLDTTKLEDQA
AQSRALLHSAQAGLMEAQATVVESHNNLERLKEIQKLSGGKLPSRQELDTAAAVFKRASA
GEATAQAKIDEAQAKLKLDETNLAKATIRSPIDGIVLVRGVEPGQTVAASLQAPVLFTLA
EDLRQMILYVNVDEADVGQVAVKQPATFTISAYPDRQFQARITQVRYAARTENNVVTYEA
LLAVDNADLSLRPGMTATADIIVRTIENALLVPNVALRFSPPVQREKGQSGPDFIASLLP
RPPRPQPLQPQAAKNSPQVWSLDDNGVPQPIAVKPGASDGRMTQILEGDLTVGQALLVDM
EKTSP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaccgctttggacaattcattcgagcaagtcgtcctccagcgtagtacgccg
ttctataagcgtttctggttttggattctgctgctaacgcttggaatactggctacagtc
agcggaatactgcgtccggacggcaacagtacgctaccccgtttcaaaactgcgccagta
gaacgcggcaaccttattgttacggtcaccgcgaccggcaccttgcaaccggtcaaacag
gtcatagtggggacggaagtgtccggcacggtgaaaagtgtcgccgtggattataatgac
ccggttaaggccggacaagtactagccatgttagataccaccaaattggaagaccaagcg
gcgcaatcacgtgctttattgcactcggcgcaagcgggtctcatggaagcccaagccact
gtagtagaatcacacaacaacctagaacggcttaaagagatacaaaaattgagcggtggt
aaactcccttcccggcaggaattggacaccgcagcagccgtgtttaaacgcgctagcgcg
ggtgaagctaccgctcaagctaaaatcgatgaagcccaagccaaactcaagctagatgaa
actaatcttgccaaagcgaccatccgctcacccatagacggcattgtgctggtgcgcggt
gtcgaaccgggtcagacagtggcagcttcattacaagcaccagtgctcttcaccctagcc
gaagatttacgccaaatgatcctgtatgtgaacgtagacgaagctgatgttggtcaagta
gcagtcaaacaacccgccactttcaccatttcggcctatccggatcgccagtttcaggcg
cgcatcactcaggtgcgctatgccgcacgcacggaaaacaatgtggtgacttatgaagcg
ttgttggcagtggataacgcggatttatcgctgcgcccaggcatgactgccactgccgac
attattgtgcggacgatagaaaacgccttacttgtgcctaatgttgccttgcgctttagt
cccccagtgcagcgggaaaagggtcaaagcggtcctgacttcattgcgagtctactgccg
cgtccgccacgcccgcaaccgctacaaccacaagccgcgaaaaactcaccacaggtctgg
agtcttgatgataacggggttcctcaaccaatagcggtaaaaccaggggctagcgatggt
cgcatgacccagatattggaaggtgatctcactgtggggcaagccttattggtggatatg
gaaaaaacctcgccatga
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