Thioploca ingrica: THII_3761
Help
Entry
THII_3761 CDS
T03616
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tig
Thioploca ingrica
Pathway
tig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THII_3761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_3761
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THII_3761
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
THII_3761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_19
UvrD-helicase
AAA_22
UB2H
Kinesin
AAA_7
AAA_16
HTH_Tnp_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAP58058
UniProt:
A0A090AI49
LinkDB
All DBs
Position
complement(4548554..4550536)
Genome browser
AA seq
660 aa
AA seq
DB search
MSTAFQLQAHFKPMGDQPEAIKQLITGLTRGDKHQILLGVTGSGKTFTIANVIQAVQRPT
LILAPNKTLAAQLYSEMRQFFPHNAVEYFVSYYDYYQPEAYMPASDTYIEKDAAINEQID
QMRLSATKALLERPDAIIVASVSAIYGLGDPNWYLQMVLHLVRGESIEQRFILRRLAELQ
YLRNETVLERGTYRVRGEVIDIYPAESERDAIRIELFDDEIESLRYFDPLTGHLLRRVPR
LTIYPKNHYVTPRAILLQAIDNIKAELRERLTQLYAAQKLVEAQRLEQRTGYDLEMIAEL
GYCSGIENYSRYLSQRQPGEPPPTLFDYLPEQGLLVVDESHVTVPQLGAMYKGDRSRKET
LVEYGFRLPSALDNRPLTFAEFERLAPQIIFTSATPGPYEYQHAIQVVEQVVRPTGLVDP
TIEIRPVASQVDDVLSEINARITHQERVLITTLTKRMAEDLTEYLMEHGVKTRYLHADID
TLERVEIIRDLRLGIFDVLVGINLLREGLDIPEVSLVAIFDADKEGFLRSERSLIQTIGR
AARHIHGQAIFYADKVTLAMQRAIEETERRRIKQILYNQQQGITPRGIEKAVTDILDSGE
RVAKVAETHAEYAPLSPQQFAKKIKQLEKEMYQAAANLEFEKAAQLRDQIKWLRDKQLVS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagcatttcagttacaggctcattttaaaccaatgggcgatcaacccgaagca
attaagcaattaatcacgggcttaacccgaggtgataaacatcaaattctattgggtgtc
accggttccggcaagacttttacgatagctaacgttatccaagcggtgcaacgtcctact
ttgattctcgcacccaataaaacgttagcggcacagttgtatagcgaaatgcgccaattt
tttccgcataacgcggttgaatattttgtttcttattacgattattaccaaccggaagct
tatatgccggcatcagatacttatattgaaaaagatgcggctatcaatgagcagattgat
caaatgcgtttatccgctaccaaagccctgttagaaagacccgatgcgattattgtggct
tccgtatccgctatttatggactgggtgatcccaattggtacctacagatggtattacat
ttagtgcgtggtgaatccattgagcaacggtttattttacgccgtttagctgaattgcaa
tatcttcgtaacgaaaccgtattagagcgaggaacttatcgagtccgaggtgaagtgatt
gatatttacccggctgaatccgaacgcgatgccattcgtattgaattatttgatgatgaa
attgaatcactccgttattttgatcccttgaccggacacttattgcggcgggtaccccgg
ctgacaatttatcctaaaaatcattatgttactccacgcgctattttattacaagcgatt
gataacattaaagctgaattaagagaacgcttaacccaattatatgcggcgcagaaatta
gtcgaagcacaacgtttagaacaacgaacgggatatgacttagaaatgatagccgaatta
ggttattgttccggtattgaaaattactcgcgctatttatcgcaacgacaaccgggggaa
ccaccgccgactttatttgattatttaccagaacagggtttgttagtcgttgatgagagt
catgtcacggttccgcaactcggtgccatgtacaaaggcgatcgttcgcggaaagaaacg
ctagtagaatatggctttcggttaccatccgcattagacaatcgcccgttaacttttgct
gaatttgaacggttagcgccacaaattatctttacctctgccacgccgggaccttatgaa
tatcaacatgcaattcaagtggttgaacaagtcgttcgaccaaccggtctcgtggatcca
accattgagattcgtccagtagccagccaagttgatgatgtcctgtcagaaattaatgcg
cgcatcacccaccaggaaagagtcctaatcacgaccttaaccaagcgcatggcagaagat
ttaaccgaatacttaatggaacatggcgtaaaaacgcgctatttacatgccgacattgat
accctcgaaagagtagaaattatccgagacttacggttaggaatatttgatgtgttagtg
ggcattaacctcctgcgagaaggactcgatattccggaagtatcactggtagcgattttt
gatgccgataaagaaggttttttacgctccgaacgttcgttaattcaaaccatcggacgg
gcagcacgtcatattcatggacaagctattttttatgccgataaagtcaccttagccatg
caacgggcgattgaggaaaccgaacgccgccgcatcaaacaaatcctgtataatcaacaa
caaggcattaccccgcgcggtatagaaaaagcggttactgacattttagacagtggtgaa
agggtcgctaaagtagcggaaacgcacgcggaatatgcgcccctatcaccccaacaattt
gctaagaaaataaaacaattagaaaaggaaatgtatcaagctgccgccaatttggaattt
gaaaaagcggcacaattacgggatcaaattaagtggctacgagataaacaactggtatct
taa
DBGET
integrated database retrieval system