KEGG   Thioploca ingrica: THII_3761
Entry
THII_3761         CDS       T03616                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
tig  Thioploca ingrica
Pathway
tig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    THII_3761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tig03400]
    THII_3761
DNA repair and recombination proteins [BR:tig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     THII_3761
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      THII_3761
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_19 UvrD-helicase AAA_22 UB2H Kinesin AAA_7 AAA_16 HTH_Tnp_1 AAA_25
Other DBs
NCBI-ProteinID: BAP58058
UniProt: A0A090AI49
LinkDB
Position
complement(4548554..4550536)
AA seq 660 aa
MSTAFQLQAHFKPMGDQPEAIKQLITGLTRGDKHQILLGVTGSGKTFTIANVIQAVQRPT
LILAPNKTLAAQLYSEMRQFFPHNAVEYFVSYYDYYQPEAYMPASDTYIEKDAAINEQID
QMRLSATKALLERPDAIIVASVSAIYGLGDPNWYLQMVLHLVRGESIEQRFILRRLAELQ
YLRNETVLERGTYRVRGEVIDIYPAESERDAIRIELFDDEIESLRYFDPLTGHLLRRVPR
LTIYPKNHYVTPRAILLQAIDNIKAELRERLTQLYAAQKLVEAQRLEQRTGYDLEMIAEL
GYCSGIENYSRYLSQRQPGEPPPTLFDYLPEQGLLVVDESHVTVPQLGAMYKGDRSRKET
LVEYGFRLPSALDNRPLTFAEFERLAPQIIFTSATPGPYEYQHAIQVVEQVVRPTGLVDP
TIEIRPVASQVDDVLSEINARITHQERVLITTLTKRMAEDLTEYLMEHGVKTRYLHADID
TLERVEIIRDLRLGIFDVLVGINLLREGLDIPEVSLVAIFDADKEGFLRSERSLIQTIGR
AARHIHGQAIFYADKVTLAMQRAIEETERRRIKQILYNQQQGITPRGIEKAVTDILDSGE
RVAKVAETHAEYAPLSPQQFAKKIKQLEKEMYQAAANLEFEKAAQLRDQIKWLRDKQLVS
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgtcaacagcatttcagttacaggctcattttaaaccaatgggcgatcaacccgaagca
attaagcaattaatcacgggcttaacccgaggtgataaacatcaaattctattgggtgtc
accggttccggcaagacttttacgatagctaacgttatccaagcggtgcaacgtcctact
ttgattctcgcacccaataaaacgttagcggcacagttgtatagcgaaatgcgccaattt
tttccgcataacgcggttgaatattttgtttcttattacgattattaccaaccggaagct
tatatgccggcatcagatacttatattgaaaaagatgcggctatcaatgagcagattgat
caaatgcgtttatccgctaccaaagccctgttagaaagacccgatgcgattattgtggct
tccgtatccgctatttatggactgggtgatcccaattggtacctacagatggtattacat
ttagtgcgtggtgaatccattgagcaacggtttattttacgccgtttagctgaattgcaa
tatcttcgtaacgaaaccgtattagagcgaggaacttatcgagtccgaggtgaagtgatt
gatatttacccggctgaatccgaacgcgatgccattcgtattgaattatttgatgatgaa
attgaatcactccgttattttgatcccttgaccggacacttattgcggcgggtaccccgg
ctgacaatttatcctaaaaatcattatgttactccacgcgctattttattacaagcgatt
gataacattaaagctgaattaagagaacgcttaacccaattatatgcggcgcagaaatta
gtcgaagcacaacgtttagaacaacgaacgggatatgacttagaaatgatagccgaatta
ggttattgttccggtattgaaaattactcgcgctatttatcgcaacgacaaccgggggaa
ccaccgccgactttatttgattatttaccagaacagggtttgttagtcgttgatgagagt
catgtcacggttccgcaactcggtgccatgtacaaaggcgatcgttcgcggaaagaaacg
ctagtagaatatggctttcggttaccatccgcattagacaatcgcccgttaacttttgct
gaatttgaacggttagcgccacaaattatctttacctctgccacgccgggaccttatgaa
tatcaacatgcaattcaagtggttgaacaagtcgttcgaccaaccggtctcgtggatcca
accattgagattcgtccagtagccagccaagttgatgatgtcctgtcagaaattaatgcg
cgcatcacccaccaggaaagagtcctaatcacgaccttaaccaagcgcatggcagaagat
ttaaccgaatacttaatggaacatggcgtaaaaacgcgctatttacatgccgacattgat
accctcgaaagagtagaaattatccgagacttacggttaggaatatttgatgtgttagtg
ggcattaacctcctgcgagaaggactcgatattccggaagtatcactggtagcgattttt
gatgccgataaagaaggttttttacgctccgaacgttcgttaattcaaaccatcggacgg
gcagcacgtcatattcatggacaagctattttttatgccgataaagtcaccttagccatg
caacgggcgattgaggaaaccgaacgccgccgcatcaaacaaatcctgtataatcaacaa
caaggcattaccccgcgcggtatagaaaaagcggttactgacattttagacagtggtgaa
agggtcgctaaagtagcggaaacgcacgcggaatatgcgcccctatcaccccaacaattt
gctaagaaaataaaacaattagaaaaggaaatgtatcaagctgccgccaatttggaattt
gaaaaagcggcacaattacgggatcaaattaagtggctacgagataaacaactggtatct
taa

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