Thioploca ingrica: THII_3896
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Entry
THII_3896 CDS
T03616
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tig
Thioploca ingrica
Pathway
tig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THII_3896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tig03400
]
THII_3896
Enzymes [BR:
tig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THII_3896
DNA repair and recombination proteins [BR:
tig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THII_3896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
BAP58193
UniProt:
A0A090AIG2
LinkDB
All DBs
Position
complement(4716607..4717374)
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AA seq
255 aa
AA seq
DB search
MTVTMIKNRHHQYLNTMGITVWVRRPPFISLAEPITSVNETLTTSPPLEVVIPSSLDPSQ
RETQTIPIKIDWKTLQQQVSTCTACPLHQTRTQTVLGVGNRQADWMFIGEAPGAEEDAQG
EPFVGRAGQLLNAMLYAIGLRREEVYIANIVKCRPPNNRNPTHEESTRCNLFLQQQLALV
KPKLIIALGRIAAQHLLATAEPIGQLRGRRFEYAHLSIPLIATYHPAYLLRRPTEKRRAW
QDLQFICQQMTLLKS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcacgatgattaagaatcgccatcatcagtaccttaacaccatgggaataacg
gtgtgggtacggcgacccccttttatctcattggcagaaccgattacatctgtcaatgag
actttaacgacatcaccaccacttgaagtcgtgatcccctcttcattagacccttcgcaa
cgagaaacccaaacgattccaattaagatcgattggaaaacactgcaacaacaagtcagc
acttgcaccgcttgcccattacatcaaactcgaactcaaactgtactgggagtaggtaac
cgacaagcggattggatgttcattggtgaagcacccggtgctgaagaagatgcgcaaggt
gaaccctttgttggtcgtgcgggacaattattaaatgccatgctttatgcaatcggatta
cgccgagaagaagtttatattgctaatatcgttaaatgtcgcccaccgaataatcgtaat
cctactcatgaagaatcaacccgttgtaacctctttttacaacaacaactggctttagtt
aaaccaaaattaattattgcactcggtcgaattgctgctcaacatttattagcgaccgct
gagccaattggtcaattacgcggtcgacgttttgaatatgcccatctgagtatcccattg
atagcgacttatcatccggcttacttgttacgtcgcccaactgaaaaacgtcgagcttgg
caagacttacaatttatttgtcaacaaatgacgctattgaaatcatga
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