Thalassospira indica: DY252_01875
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Entry
DY252_01875 CDS
T05581
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tii03016
]
DY252_01875
Enzymes [BR:
tii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DY252_01875
Transfer RNA biogenesis [BR:
tii03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DY252_01875
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXO13139
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All DBs
Position
383271..383885
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AA seq
204 aa
AA seq
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MTNFLHLGDLPDDLDLGKVVAIDSETMGLNPHRDRLCVVQLSSGDGNAHLVKFDGEDYSA
PNLKKLLADPSVLKLFHFGRFDIAVMDKYLGVRCAPVYCTKIASKLVRTYTDRHGLKDVL
RETVGVEISKQQQSSDWGAAELSKEQIDYAASDVLYLHKAKEELDRRLAREGRTEIAQAC
FDFLPIRATLDLAGWEETDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatttcctccatctcggagatctgcccgatgaccttgaccttggaaaggtcgtg
gccattgacagtgagaccatgggccttaacccgcaccgcgaccgcttgtgtgtcgtgcag
ctttcaagcggggatggcaacgcccatctggtcaagtttgatggggaagattacagcgcg
ccgaacctgaaaaagcttctggctgatccgtctgtgttgaagctgtttcatttcgggcgt
tttgacatcgcagtaatggacaaatatctcggcgtgcgctgtgcgccggtctattgcacc
aagattgcctctaaactggtgcgcacctataccgaccgtcatggtctgaaggatgtgttg
cgcgagaccgtcggggtcgagatttccaagcagcagcagagctccgactggggcgctgcc
gagctttccaaggaacagatcgattacgcggcctcggacgttttgtatctgcacaaagcc
aaggaagagcttgatcgtcgtctggcgcgcgaagggcgtaccgagatcgcgcaggcctgt
tttgactttctgccgatccgcgcgacgcttgatctggcgggctgggaagaaaccgatatc
tttgcccattcataa
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