Thalassospira indica: DY252_01995
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Entry
DY252_01995 CDS
T05581
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tii
Thalassospira indica
Pathway
tii03030
DNA replication
tii03410
Base excision repair
tii03420
Nucleotide excision repair
tii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DY252_01995
03410 Base excision repair
DY252_01995
03420 Nucleotide excision repair
DY252_01995
03440 Homologous recombination
DY252_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tii03032
]
DY252_01995
03400 DNA repair and recombination proteins [BR:
tii03400
]
DY252_01995
Enzymes [BR:
tii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DY252_01995
DNA replication proteins [BR:
tii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DY252_01995
DNA repair and recombination proteins [BR:
tii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DY252_01995
NER (nucleotide excision repair)
GGR (global genome repair) factors
DY252_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
WHD_BrxR
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AXO13160
UniProt:
A0ABM6XUH9
LinkDB
All DBs
Position
complement(408117..410948)
Genome browser
AA seq
943 aa
AA seq
DB search
MTDSAPSSTGSSADKSPRRVVLVDGSGFIFRAFHALPPMTSPDGTPVNAVYGFCTMLMKL
REDTKPDHMAVIFDTKGKSFRNDFYPDYKAHRPPPPEELVPQFGLIRDATRAFNLPSIEL
EGFEADDLIATYARQAEAEGSDVIIVSSDKDLMQLVTDRVQMFDAMKNRTIGAAEVLEKF
GVSPDKVIDIQALAGDSVDNVPGVPGIGIKTAAQLIDEYGDLDSLLERAGEIKQPKRREK
LIENAELARISRNLVTLKTDVPVVEPLGDFELREPDPEVLLSFIASHGFKSLISKVKSKF
GGDVEFDSPTAAGVGVNDIKVEKAEYELVQDEDRLKHWISEAEYLGTVAVDTETTSLDAH
TAKLVGVSLSTEPGNGCYIPLGHVSGEAQGGFDFGDNPADSPSNSKDAPKQIKLERAIEL
LKPLLEDPGVLKVGQNLKYDMIVLARHGIKVAPMDDTMVLSYVLDGTSHGHGMDELAELH
LDYKPISFKDVCGSGKTQITFDQVPLDKALDYAAEDADITLRLHRLLKPRIAQEHMASVY
ETLDRPLVPVLAEMEGLGVKVDAEILKNLSEDFAKRMAALEETIHEMAGEPFNLGSPKQL
GEILFDKMSLPGGKKTKTGAWQTGADVLEALAAQGHDLPAKLLEWRQLSKLKSTYTDALA
HHINPNTGRVHTSYGQTNVNTGRLSSNDPNLQNIPIRSEEGRKIRTAFIAEPGHKLISAD
YSQIELRLLAHVAEIDALREAFKNGEDIHAATASKVFGVPIKGMDPMVRRKAKAINFGII
YGISAFGLANQLGIAQKEAKEFIEAYFEIYPGIRDYMDEAKEFAKKHGFVRTLFGRHIHI
NGINDKNGMRRSFGERAAINAPIQGGAADIIKRAMIAVPNALLDAGLKTRMLLQVHDELI
FEAPEDEAEKAIKTIREVMENAAHLSVPLIADAGIGDSWADAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgacagattccgccccgtccagcaccggttcgtccgccgacaaatccccgcgtcgcgtc
gttctggttgacggttccggctttattttccgcgccttccacgccctgccaccgatgacg
agccccgatggcacgccggtgaatgcggtctatggcttctgcaccatgttgatgaagctg
cgcgaagataccaaaccagaccatatggcggtgatctttgacaccaagggcaagtcgttc
cgcaacgacttctatcccgactacaaggcccatcgtccgccgccccccgaagaactggta
ccgcagtttggcctgatccgtgatgcgacccgtgcatttaatctgccctccatcgagctt
gaaggttttgaggccgacgatctgatcgcgacctatgcccgccaggccgaggcagaaggt
tctgacgtgattatcgtgtcttcggacaaggacctcatgcagttggtcaccgatcgggtg
caaatgtttgatgcgatgaagaatcgcaccatcggcgctgccgaagttctggaaaaattc
ggcgtttccccggacaaggtcattgacattcaagcacttgcaggcgattccgtcgataac
gtcccaggtgtgcccggtattggcattaaaaccgccgcccaacttattgatgaatatggt
gatcttgattctctactggaacgcgcaggcgaaatcaaacagcccaagcgccgcgagaaa
ctcatcgaaaatgccgagcttgcccgtatttcgcgcaatctggtgacgctgaaaaccgat
gtcccggtagtcgaaccactcggtgacttcgaattgcgtgaacccgatccggaagttctt
ttaagcttcatcgcaagtcacggctttaaatcattgatttctaaagtaaagtcgaaattc
ggcggcgatgttgaatttgacagcccgacggcggccggtgttggcgtcaatgatatcaag
gtcgaaaaggctgaatatgaactggtgcaggatgaagaccgcctaaagcactggatttcc
gaggccgaatatctgggtaccgtcgcggtcgataccgaaaccacgtcacttgatgcccat
acggccaaactggtcggtgtttcactttcgaccgagccgggcaatggctgctatatcccg
cttggtcatgtcagtggcgaagcacagggcggctttgattttggcgacaatcccgccgac
agcccaagcaacagcaaggacgcgccgaagcaaatcaagcttgagcgcgcgattgagctg
ctcaaaccgctgcttgaagaccccggtgtgctgaaggtcggtcagaacctgaaatacgat
atgatcgttctggcccgccatggcatcaaggtcgcgcccatggacgataccatggtgctt
tcctatgtgcttgatggcaccagccacgggcacggcatggatgaactggctgagctgcat
ctggattacaaaccgatttccttcaaggatgtctgcggcagtggcaagacccagatcacc
ttcgatcaggtcccgctcgacaaggcgcttgattacgcggccgaggatgccgatatcacg
ctgcgcctgcatcggttgctcaaaccccgcatcgcgcaggaacatatggccagcgtctat
gagacgcttgatcgtccgctggtgccggttctggccgaaatggaaggcctcggtgttaaa
gtcgatgccgagatccttaaaaacctgtccgaagacttcgccaaacgcatggccgccctt
gaggaaaccattcacgaaatggcgggcgagccgtttaaccttggcagccccaagcagctt
ggcgaaatcctgtttgacaagatgagcctgcccggcggcaaaaagaccaaaaccggcgca
tggcaaaccggggcagatgtgcttgaagcccttgccgcccaaggccatgacctgccagcc
aagcttctggaatggcgtcagctttccaagctcaaaagcacttataccgacgcgctggcg
caccatatcaaccccaatacgggccgcgtgcacaccagttacgggcaaaccaacgtcaat
accgggcgtttgtcatcgaatgacccgaacctgcaaaacatcccgatccgaagcgaggaa
ggccggaagatccgcacagcctttatcgccgagcccggtcacaaactgatttctgccgac
tattcgcagattgaattgcgccttctggcccacgtggccgagatcgacgccctgcgcgag
gcgtttaaaaacggcgaggacatccacgccgcaaccgcatcgaaggtgtttggcgtcccg
atcaagggcatggacccgatggtccgtcgcaaggccaaggcgatcaacttcggcatcatt
tacggcatctcggcctttggtctagccaaccagctcggcatcgcccagaaggaagccaag
gaattcatcgaagcctatttcgagatttatcccggcatccgcgattacatggacgaggcc
aaggaattcgccaaaaagcacggctttgtccgcaccctgtttggtcgccatatccatatc
aacggcatcaacgacaaaaacggcatgcgccgaagctttggcgaacgtgccgcgatcaac
gcgccgattcagggcggggcggctgacatcatcaaacgcgcgatgattgcagtcccgaac
gcgttgctggatgccgggcttaaaacccgcatgctgcttcaggtccacgatgaattgatc
tttgaggccccggaagacgaagccgaaaaagcgatcaagaccatccgcgaagtcatggaa
aacgccgcccacctgtcggtgccgctgattgccgatgccggcatcggggatagctgggcc
gacgcgcactag
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