Thalassospira indica: DY252_02575
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Entry
DY252_02575 CDS
T05581
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tii03400
]
DY252_02575 (addB)
Enzymes [BR:
tii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DY252_02575 (addB)
DNA repair and recombination proteins [BR:
tii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DY252_02575 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
T3SS_ATPase_C
Motif
Other DBs
NCBI-ProteinID:
AXO13262
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All DBs
Position
533083..536244
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AA seq
1053 aa
AA seq
DB search
MADLFDYMDVPAYDEASFAGEATPPSNLFFIPPGVAFADLIAKQLMAETADQPDTLPDYV
LMVPNRRSAKVMRDAFLRQSQGAVTLLPTIRPLGEADEDELAIYGAGGEQAALDLPPAIP
DLQRKLLLTQLIMGRPDHRGEKPTADQAARLAGELARFLDQVQTENCAFDDLKGLVPEEF
AEHWQLTLEFLQILTIHWPGILAAQDVSDRAMRRNALIKAQIDLWAENPPETPVLIVGST
GPFPALRDLMKAVLAMPQGRVVLPGLMAGLSHEDWAAIADDAAHPQHLLGKTLGHIGRHA
DSVLPWPALDPESDATIERRRLAREALRPAKTTHHWRHITGFATDVMDGVLRVDCSGARE
EATTIALMMREALEHPEKTCALVTPDRGLARRVATELRRWEVEIDDSAGIPLHDTAPAIY
LGLVVRAVQEEFAPVPLLELLKHPLSAAGLPPETFRVLTRLLEKKVLRGARPGPGLDGLQ
TALDGWCEDTVSRLSNSGSDSAIGRIERIRDDHARLSDLVARFKTCLDSLGDLTGDKTHA
PVHLLSCHVTAAEALAASDTQTGADRLWRGEAGEALADFVHELLNALSDFASMPGNRYGA
FLDALMADRAVRPRYGKHPRLFIWGTVEAQMQQADLTILGGLNEGVWPPEAGADPWMSRP
MRRNFGLPAPEHRVGQSAHDFQQLFCSPDVVMTRALRIEGTPTVPSRWLLRIENILRKSG
VSMEKPDAAEWRALADLIDEPAPDMRIKIGRPAAKPPVSARPARLSVTQIETWMRDPYAI
YARHILGLRKLDGIDEDPGAADYGNLIHDALDQFIARHPEHLPPDGEHELLIIGRDVFKP
LAARPGLWAFWWPRFERIAKWFIQTEAARRDAVRKSYTEQSGTLDTSSGFQVYARADRID
QLRDGGIAIIDYKTGAPPSQGDVANGFAPQLPLEAAIAEQGGFGDVPAGPPASMAFWKLS
GGDPAGEIVEINTGRMKTTPAELAHAAVDGVNGLAAAFADPDTPYLSVPHPDHAPKYSDY
VHLARLREWMGSEDVDDSANIEEKQDVGEGDKS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctgtttgattacatggacgtgcccgcctatgacgaagcctccttcgcgggg
gaggcaacgccgccctcaaacctgtttttcattccgcccggcgttgcctttgccgatctg
atcgccaaacaactgatggcggaaaccgccgatcagccagataccttgcccgactatgtc
ctgatggtgccaaaccgccgatccgcaaaggtcatgcgcgatgcgtttttgcggcaatca
cagggggcggtcaccttgcttccaaccattcgtccgctgggcgaggcggatgaagatgaa
ttggcgatttatggcgcgggcggggaacaggcggcccttgatctgccgccggccatcccc
gatctgcagcgcaaattgttgctcacccagctgatcatggggcgtcctgatcatcgcggt
gaaaagccaactgccgatcaggccgcccgtcttgcgggtgaactcgcgcgctttcttgat
caggtgcaaaccgaaaactgtgcctttgacgatctcaagggattggtgcccgaagaattc
gccgaacactggcagctcaccctcgaatttctgcaaattctcaccatccactggccgggt
attcttgccgcacaggatgtgagtgaccgggccatgcggcgcaacgctttgatcaaggct
cagattgacctttgggccgaaaacccgcccgaaacgcccgttctgattgtcggctccacc
ggcccgtttccggccttgcgcgatttgatgaaggcagttctcgccatgccacagggccgc
gtggttctgcccggtctgatggcggggctgagtcacgaagactgggcggcgattgccgat
gatgctgcccatccacaacatcttctgggcaagacacttggccatattggtcgccatgcc
gatagtgttctgccctggccggcccttgatcccgaaagcgatgccacgattgagcgccgc
cgtctggcccgcgaggcactacgacctgccaaaaccacccatcactggcgccatatcaca
ggcttcgccacggatgtgatggatggcgtcctgcgtgttgattgctctggcgcacgtgaa
gaggcaaccacgattgcgcttatgatgcgcgaggcgctcgaacatcctgaaaagacctgc
gcactggtgacacctgatcgtggtcttgcccgtcgggtggcgacggaactccgccggtgg
gaggttgaaatcgacgattcagcgggcatcccgctgcatgacacggcaccggcgatctat
ctgggccttgtcgtgcgcgccgtgcaggaagaattcgccccggttccgcttctggaattg
ctcaaacacccactatcggcagctggcctgccacccgagaccttccgcgttctgacccga
ttgctcgaaaagaaagttctgcgtggcgcgcgacccggccccgggttggatgggttgcaa
accgcccttgatggctggtgcgaggatacagtttcccgcctgagtaattccggatcagac
agcgccattggccggattgagcgaattcgcgatgatcatgcgcggctgagcgatctggtt
gcccggtttaaaacctgtcttgattcgctgggcgatctgaccggcgataaaacccatgcg
ccggttcatctgctgagctgtcatgtcaccgcggcggaggcattggcagcaagcgacacc
caaaccggtgcggatcgcctgtggcgcggcgaagcgggcgaggcgctggcggatttcgtc
catgaattgcttaatgcgctttctgactttgcctcgatgccgggcaatcggtatggtgcg
ttcttggatgcgttgatggcggaccgcgccgtgcgcccgcgttatggcaagcatccgcgt
ctgtttatctggggaacggtcgaagcccagatgcagcaagccgatctgaccattctgggc
gggcttaatgaaggtgtctggccacccgaagccggggccgatccgtggatgagccgcccg
atgcggcgtaacttcgggctgcctgcccccgaacatcgggtcgggcaatcagcccatgat
ttccagcagctgttttgctcgcccgatgtggtgatgacccgtgccctgcgtatcgaaggc
acgccgaccgtgccgtcccgttggttgttacggattgaaaacattctgcgcaaatcgggt
gtttcaatggaaaagcccgatgctgccgaatggcgtgcactggccgatctgattgacgaa
ccggcacctgatatgcgtatcaagatcgggcgcccggctgccaaaccaccggtatccgcc
cgcccggctcgcctgtcggtgacccagatcgaaacgtggatgcgtgatccctatgcgatc
tatgcccggcatatccttggcctgcgcaagcttgacgggatcgacgaagatcccggtgca
gccgattacggcaacctgattcacgatgcccttgatcagttcatcgcccgccatcctgaa
catttaccaccggatggcgaacatgaattgctgatcattggtcgcgatgtgttcaaaccg
cttgccgcacgtcccggtctttgggccttctggtggcctcggttcgaacgcatcgccaaa
tggttcatccagaccgaagcagcgcgtcgcgatgccgtgcgcaaatcctataccgaacaa
tccggcacccttgataccagcagcggttttcaggtctatgcccgtgccgaccgcattgat
cagctgcgcgacggcggcatcgcgatcattgactataaaaccggcgcaccacccagtcag
ggcgatgttgccaacgggtttgcgccgcaattgccgcttgaagctgccattgccgaacag
ggtgggtttggcgatgtgcccgccggccccccggccagcatggcgttctggaaactttcg
ggcggggatccggcaggcgagattgttgaaatcaacacaggccggatgaaaacgaccccg
gccgaactcgcccacgcggcggtggatggtgtgaatgggctggcggcggcctttgctgat
cccgatacgccgtatctcagtgttccgcatcccgatcacgcgccgaaatattccgactat
gtccatctcgcgcgcctgcgtgaatggatgggcagcgaggatgttgatgatagcgctaac
atcgaagaaaaacaggatgttggcgaaggggataagtcatga
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