Thalassospira indica: DY252_02765
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Entry
DY252_02765 CDS
T05581
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tii03016
]
DY252_02765 (thpR)
Enzymes [BR:
tii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DY252_02765 (thpR)
Transfer RNA biogenesis [BR:
tii03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DY252_02765 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
DUF2019
DUF6634
Motif
Other DBs
NCBI-ProteinID:
AXO13297
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All DBs
Position
585184..585780
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AA seq
198 aa
AA seq
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MRLFVGVEIPHDIATDLYPLGRAIKGLDAQTPENMHITLKFIGNVDPGLAGEIDQALSQV
AFEPFDLQVSGLDMFASNRKVRIFWAGVKDQPALRTLANRVENALLALEECPDMDMRKFT
PHITLGRNRDAARAVVEQAIVDHGDVSSRVFTVDRFCLYESHATADGPEFRVIAAYDGKD
GPLPEPDLSEAFATEDFQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtttgttggtgtggaaattccccacgatattgcgaccgacctttatccgctg
gggcgtgcgatcaaggggcttgatgcccagaccccggaaaacatgcacatcaccctgaaa
ttcatcggcaatgtcgatccgggtctggcgggtgagattgatcaggccttgtcacaagtg
gcgttcgagccctttgatctgcaggtatcgggccttgatatgtttgcctcaaaccgcaag
gttcgcattttctgggccggggtaaaggatcaaccggctctgcgcacacttgccaatcgg
gtggaaaatgcgcttctggcgctggaagaatgcccggatatggatatgcgcaaattcacc
ccgcatattacgttggggcgtaaccgtgacgctgcgcgtgccgtcgtcgaacaggcgatt
gtcgatcatggggatgtgtcatcacgggtgttcaccgttgatcgtttctgtttgtatgaa
agccacgcaacggcggatggtccggaatttcgcgtgattgccgcctatgacggcaaggac
gggccgcttcctgagccagacctctcagaggccttcgcaacagaggattttcaatga
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