Thalassospira indica: DY252_03875
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Entry
DY252_03875 CDS
T05581
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tii
Thalassospira indica
Pathway
tii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DY252_03875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tii02000
]
DY252_03875
Transporters [BR:
tii02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DY252_03875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AXO13443
LinkDB
All DBs
Position
complement(789716..791620)
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AA seq
634 aa
AA seq
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MRHHTLILIVALTTMLTGVAKTHAVEFGEAPELAKLVEDGNLPPVKDRLPTAPMIVTPNE
RVGTYGSTWKMAQRNSRDHALLIRTIGYEPLLRWTPQWSSTIPNVALSFQPSSDATEFFF
RLRQGMRWSDGTPFTADDIVFWYEDILNNPAFADAVPEWLTSGGNTVQVDEIDPYTVAFR
FSKPYGLFPTALARPEGVEPVSYPAHFLKPLLPKYNANADADAQKMGYSGWKERFIDVFG
QPGTIDDPTRWNNPDVPTLNAWVLTGVYGKDDPLIAKRNPYYWKIDPTGRQLPYIDTVSM
TLVPSKSAAGDAAIAGKVNMQERHIGTRANEVLAQNKDLQAFTLIESDMNILTLSLNLND
KDPVLRDIFQNKDFRVALSYAIDRETIIDRFVPGALPHQAAPRPESPQYHTVLARQFMAY
NVELARTYIAKAGLNTFNDDGILLRPDGKPLSFTIDTEGADRFQMLDAVMGYWRELGIDV
RARNLARDEFVALRDRNEHNASAWGGDGGLDAMLIPINYLPMSSESSWFATGWANWYLNP
ESPDAITPPQDVQDQLALYDQLKATANAEKQNQLMRDILDISANQFYLMGIALPPNRKGV
VARDFHNVPKVMPAAWSYATPAPTNPSQYFIQPE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcaccatactcttatcctgattgttgcattgacgacaatgctgactggcgttgcc
aaaacgcatgccgttgaatttggtgaagcacccgaacttgccaaactggttgaggacgga
aatctgccgccggtcaaggatcgcctgccgaccgcaccgatgatcgtcacccccaatgaa
cgggtcggaacctatggcagcacctggaaaatggcgcagcggaatagccgcgaccatgcc
ctgctgatcaggacaatcggatatgagccactgctgcgctggaccccgcaatggtcttcg
accatccccaatgtcgcgctgtcattccagcccagcagcgatgcaaccgagttctttttc
cgtctgcggcaaggcatgcgttggtcggatggtaccccgtttacggctgatgacatcgtt
ttctggtacgaagatatcctgaacaatccggcctttgccgatgcggtgccggaatggctg
acatcgggtggcaataccgtgcaagtcgacgagatcgatccctataccgttgcgtttcgt
ttcagcaagccatatggacttttcccgaccgcccttgcccgccccgaaggcgttgagccg
gtaagctatccggcgcattttctgaagccgcttttgccgaaatataatgccaatgccgat
gccgacgcccagaagatgggttattcaggctggaaagagcgttttatcgacgtatttggg
cagcccggcacgattgatgacccgacgcgctggaacaatcccgatgtgccgaccctgaat
gcctgggtgcttaccggggtatatggcaaggacgatccactgatcgccaagcgcaatccc
tattactggaaaattgatccgaccggccgtcaacttccctatatcgacacggtttccatg
acactggtgccgtcaaaaagcgcggctggtgatgcggcaattgccggcaaggtcaatatg
caggaacgccatatcggcacgcgcgccaacgaagttctggcccaaaacaaggatcttcag
gccttcacgctgatagagagcgatatgaatatcctgaccttgtcacttaatcttaatgac
aaggacccggtgctgcgcgacatcttccagaacaaggattttcgcgttgccctgtcatat
gcgattgatcgcgaaaccatcattgatcgctttgtccccggtgccttgccccatcaggcg
gcaccaagaccggaaagcccgcaatatcacacggtactggcgcgacagttcatggcatat
aatgtcgaactggcgcggacatatattgcgaaagcgggactgaacaccttcaatgatgac
ggcatcctgttacgtccggatggcaagccgctttcattcacgattgataccgaaggtgcc
gaccgctttcagatgctcgatgcggtcatggggtactggcgtgaacttggcattgatgtg
agggcccggaaccttgcgcgtgacgagtttgtcgcgttgcgcgatcgcaatgaacacaat
gccagtgcatggggcggcgatggcggccttgatgcgatgctcattccgatcaattacctg
ccgatgtcttctgaatcgtcatggtttgcaaccggatgggccaactggtacctgaacccg
gaaagccccgatgccattaccccgccccaggatgttcaggatcagcttgcgctttatgac
cagctgaaagcgacagcaaatgcggaaaaacaaaatcaactgatgcgcgatattctcgac
atcagtgcaaatcagttttaccttatgggaattgcattaccgccaaacagaaaaggcgtg
gtagcacgggacttccacaatgttcccaaggtcatgcctgccgcctggagttatgcgaca
cctgcaccgaccaatccaagtcagtattttattcagcccgagtaa
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