Thalassospira indica: DY252_04160
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Entry
DY252_04160 CDS
T05581
Name
(GenBank) PAS domain S-box protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tii03000
]
DY252_04160
Transcription factors [BR:
tii03000
]
Prokaryotic type
Helix-turn-helix
Other families
DY252_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
PAS
Sigma54_activ_2
PAS_4
AAA_5
PAS_8
AAA
Mg_chelatase
AAA_16
PAS_7
PAS_3
HTH_8
GAF_PdtaS
Diguanyl_cycl_sensor
AAA_2
TIP49
T6PP_C
IstB_IS21
AAA_22
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXO13496
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Position
complement(854181..856127)
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AA seq
648 aa
AA seq
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MRISEINPLPVMIENLHLQALLAHTHPTLLIHPKTDRIVFANQAAANLLGRSIEELLVTS
MSALHKGQVPSLVVFSEAAFYHGFAWTRGLDLTRPDGTELKLEHEARPLILDGEDYLTVT
ISDLDARHRRDVDSEADDYLREGIAEWRRAERFFREIERENQLILGAAGEGIYGVNSDGI
TTFVNPAAERMLGWTAEELVGREIHSIIHHSHVNGDPYHAEQCPIYNAFREGIVRRVDDE
VFWRSDGKPIRVEYTSTPIRDHGLVIGAVIVFRDITERKIAEEKLHAALAEVDRLRERLE
LENAYLQEEILSTNNHHEIIGQSDAIQGALKQIDLVAPTDANVLITGESGTGKELIARAI
HQASARSDRVLVRVNCAAIPHELFESEFFGHVRGAFTGAVRDRVGRFELADGGTLFLDEV
GEIPLELQGKLLRVLQDQKFERIGEERTREVNVRLIAATNRDLKEEVRQGRFREDLYFRL
NVFPIECRPLRERPDDIPPLASHFLRNICQRLNIAQPTLTKGQVRTLQNYGWPGNARELE
NVIERAAILAHDGKLHFDLPEQGARDSRKLAAPATEPDSKPEKTVLTRGELRQTEYDNII
HALTMTKGKVFGENGAAALLDIKPTTLASRIKKFKIDRRSFVANETID
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcagtgaaatcaatcccctaccggtgatgattgaaaacctgcatttgcaggca
ttgctcgcccacacccatccaaccttgttgattcaccccaaaacggaccggattgtcttt
gccaatcaggccgctgccaacctgctggggcgcagcattgaagagcttctggtaacctcg
atgagtgcgctgcacaaaggtcaggtacccagtctggtcgtatttagcgaggccgccttt
tatcacggatttgcttggacccgcgggctcgacctgacccgccccgacggcaccgaactg
aaacttgaacacgaagcgcggccgctcattctggacggcgaagactatctgaccgtcacg
atttccgatctcgatgcccgccatcgccgcgatgtggactctgaggccgatgattacctg
cgcgaaggcatcgccgaatggcgccgtgccgaacggtttttccgcgaaatcgaacgcgaa
aaccagctgatcctgggtgcggctggcgaaggcatttacggggtcaacagcgacgggatc
acgacattcgtcaacccggcggccgaacgtatgctgggctggacggccgaggaactggtt
ggtcgtgaaatccattcgatcatccaccattcccacgtcaacggcgacccgtatcacgcc
gaacaatgcccgatttacaacgcctttcgcgaaggtatcgtcaggcgcgtcgatgacgag
gtcttctggcgcagcgacggcaaaccgatccgggtggaatatacctccaccccgatccgt
gaccatgggctggtgatcggggcggtgattgtttttcgcgacatcaccgaacgtaaaatc
gccgaggaaaagctgcacgctgcccttgccgaggtcgaccgcctgcgtgaacggctggag
cttgaaaacgcctatctgcaggaagaaatcctctcaaccaacaaccaccatgaaatcatc
ggccagtccgatgccattcagggtgcgcttaaacagattgatcttgtcgcgcccaccgat
gccaacgttctgatcactggtgaatccgggacgggcaaggaactgattgcacgcgccatc
catcaggccagcgcgcggtctgatcgtgttctggtgcgcgtgaactgtgcggcaatcccg
catgaactgtttgaaagcgagtttttcggccatgtccgcggtgcctttaccggtgccgtg
cgcgatcgtgtcgggcggtttgaactggccgatggtggcacgctgttcttggatgaagtc
ggggaaatcccgctggaattgcagggcaagttgctgcgtgttttgcaggatcagaagttc
gaacgcatcggcgaagaacgcacacgcgaggtcaatgtccgcctgattgccgccaccaac
cgcgatcttaaggaagaagtccgtcaaggacgcttccgtgaagacctgtatttccgtctc
aacgttttccccattgaatgccgaccactccgtgaacggcccgatgatatcccgccgctg
gcatcgcacttcctgcgcaatatctgtcagcgccttaatatcgcgcagccaacactgacc
aaggggcaggtccgtaccttgcaaaactatggctggccgggaaatgcccgcgaactggaa
aacgtcatcgaacgcgcagccatcctcgcccatgacggcaagctgcattttgatctgccc
gaacagggcgcgcgcgacagccgcaaattggcagcgccggcgacagagcctgacagcaaa
ccggaaaaaaccgttctgacccggggtgagctgcgccagaccgaatatgacaacatcatc
catgcgctgaccatgaccaagggcaaggtttttggcgaaaatggtgcggcggcccttctg
gatatcaaaccaaccacgctggcctcgcgtatcaagaaattcaaaatcgaccgtcgcagc
tttgtggcaaacgaaaccatcgactaa
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