Thalassospira indica: DY252_08430
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Entry
DY252_08430 CDS
T05581
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tii
Thalassospira indica
Pathway
tii00550
Peptidoglycan biosynthesis
tii01100
Metabolic pathways
tii01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DY252_08430 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DY252_08430 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tii01011
]
DY252_08430 (mrdA)
Enzymes [BR:
tii01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DY252_08430 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tii01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DY252_08430 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
BPL_N
Motif
Other DBs
NCBI-ProteinID:
AXO14248
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All DBs
Position
complement(1788979..1790895)
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AA seq
638 aa
AA seq
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MWHRDSDRFRLFTRRALMLGAGKGVLLTGLAARMYYLQVLESDRYQTLADENRISHRLLP
PPRGLVTDRFGAPLAVNRQNYHIMIVREQTPDVRRTLEILDQIIELGPDTIERVERDAAR
RRSFVPVTVRDNLTWDEVARVGVNAPDLPGLIIDAGRSRDYPEGPHLAHTLGYVAAVSEK
ELTGDPLLELPGFTIGKSGVEKVYDLALRGTAGTSQVEVNALGRVIRELEREEGDSGNTV
VMTLDLELQRYTNQRLSDQESAAAVVMDIHNGEVLALSSHPAYDPNAFTNGISHKLWNSL
VNNPYAPLSNKAVNGTYAPGSTFKMCVALAGLEAGIISPNQKFFCNGHLDLGNARFHCWK
RGGHGWMNMHDSIKHSCDVYYYEISQKIGIDRIAAMAHKLGLGEDTGIDLPNERSGLIPT
KDWKEIQLGKRWQGGETLIASIGQGYVLATPLQLCTMTARLASGKAVRPHLTRDNVTPEG
VTSRQAEEFPELQVSRANLARIRDAMNGVTNELRGTGHGARIAIKGMEMAGKSGTSQVRR
ITMRERQTTGVLDNNDLPWKYRDHALFVAFAPVDNPRYACSVVVEHGGGGSSVAGPIVRD
LLLKAQELQSARQGISAADQPNSANLRRNPAHSDQDEG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatcgtgactcagaccggttcagactgtttacccgacgcgccctgatgctgggt
gcgggcaagggtgtattgctgacaggtttggccgcgcgcatgtactacctgcaggtcctt
gaaagcgaccgctatcagacgctggccgatgaaaaccgcatttcgcaccgcctgctgccg
ccgccgcgtggactggtgaccgaccgtttcggtgccccgcttgccgtaaaccggcagaat
tatcacatcatgatcgtgcgcgaacagacccctgatgtccgccgcacacttgaaatcctc
gatcagatcatcgagcttggccccgacacaatcgagcgcgttgaacgcgatgccgcccgt
cggcgttcctttgttccggtgacagtgcgcgataacctgacatgggatgaggtcgcacgc
gtcggtgtcaatgcccctgaccttcctggcctgatcattgatgccggacgatcacgagac
tatcccgaaggcccccaccttgcgcatacactgggttatgttgccgcggtatccgaaaag
gaactgacaggcgatccgcttttggaactgcccggctttaccattggcaaaagcggcgtt
gaaaaggtttatgacctggcactgcgtggcacggccggcaccagccaggtcgaagtcaac
gcactgggtcgcgtcattcgcgaactggaacgcgaagaaggggacagtggtaacacggtt
gtcatgacgcttgatcttgaattgcagcgctacaccaatcagcggctgtcggatcaggaa
agtgcggccgccgtggttatggacatccataatggtgaagtgctcgccctgtcgtcgcac
ccggcctatgacccgaatgcctttaccaatggtatttcgcacaagctttggaacagtctg
gtcaacaacccgtatgcaccgctttccaacaaggcggtaaatggcacctatgcgcccggt
tcgactttcaagatgtgtgtcgcacttgccggactggaagcaggcattatttcgccaaac
cagaaattcttctgtaacgggcatcttgatcttggcaatgcacgtttccactgctggaaa
cgtggcggtcatggctggatgaacatgcatgactccatcaagcattcctgtgacgtctat
tactacgaaatttcccaaaaaatcgggatcgaccggattgctgcgatggcgcacaagctg
ggccttggcgaagataccggcattgaccttcccaacgaacgtagcggcctgatcccgacc
aaggactggaaggaaatccagcttggcaaacgctggcagggcggtgaaacacttatcgcc
tctatcggacagggatatgttctggcaacaccgttgcaactgtgcacgatgacagcgcgt
ctggcctccggcaaggcggtgcgcccgcacctgacgcgtgacaacgtcaccccagaaggc
gtcaccagccgccaggccgaagaatttccggaacttcaggtcagccgcgccaatctggcc
cgaattcgtgacgcaatgaacggtgtgaccaacgaattgcgtggcacaggccatggcgca
cggatcgccatcaagggcatggaaatggctggtaaaagtggcaccagtcaggttcgccgc
atcaccatgcgcgaacgccagacaaccggggtgctcgacaataatgacttgccgtggaaa
taccgtgaccacgccctgtttgttgcctttgcgccggtcgataacccgcgttacgcctgc
tctgtggtcgttgaacacggtggtggtggttcgagtgttgcgggtccgattgtccgtgac
ctgctgctaaaagcgcaggaactgcaatctgcgcgtcagggcatctcggccgctgaccag
cccaatagtgcaaatctccggcgcaatccggcccacagcgatcaggacgagggttaa
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