Thalassospira indica: DY252_09090
Help
Entry
DY252_09090 CDS
T05581
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tii
Thalassospira indica
Pathway
tii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DY252_09090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tii03021
]
DY252_09090
03400 DNA repair and recombination proteins [BR:
tii03400
]
DY252_09090
Enzymes [BR:
tii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DY252_09090
Transcription machinery [BR:
tii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DY252_09090
DNA repair and recombination proteins [BR:
tii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DY252_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AXO16802
LinkDB
All DBs
Position
1911300..1912316
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPTKLDVTPGTDASRIGTIVAEPLERGFGQTLGNALRRILLSSLQGSAVT
AIQIDGVLHEFSSIPGVREDVTDIILNIKTMGVRMHAEGPKKMALKATGPGAVTAGQIET
GADIEILNPDLELCHLDDGATLNIEFTVDNGKGYVAASSHSSSDAPIGLIPIDAIFSPIR
KVAYKVENTRVGQDTDFDKLSLTVETNGALTPEDSVALAARILQDQLSLFVNFEEPEAVV
EEKKEDELPFNRNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKS
LNEIKDVLAQMGLHLGMEVGGWPPENIEELARKFEDPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgattcaaaagaactggcaggaactgattaagccgacgaagcttgatgttactccgggt
actgatgccagccgtattggtacgatcgtggcagaaccgctggagcgcggttttggtcag
actctgggtaacgcgctgcgtcgcattctgctgtcgtcgctccagggttcggcagttacc
gcgatccagatcgacggtgtattgcacgaattttcgtcgatcccgggtgtgcgtgaagat
gtcaccgacatcatcctgaacatcaagaccatgggcgtgcgtatgcatgctgaaggtccg
aagaaaatggctctgaaggcgaccggccccggtgccgtcaccgcaggtcagatcgaaacc
ggtgcggatatcgaaatccttaacccggatctcgagctttgccatcttgacgatggtgct
acgctcaacatcgaattcaccgttgataacggtaaaggctatgttgcagccagctcgcac
agctcgtcggacgcgccgattggtcttattccgatcgatgcgatcttcagcccgatccgt
aaagtggcctacaaggtggaaaacacccgtgttggtcaggataccgactttgacaagctg
tcgctgaccgttgaaaccaacggtgcactgaccccggaagattcggttgcgcttgctgcc
cgtatccttcaggaccagctgtcgctgttcgtcaacttcgaagagccggaagcggttgtc
gaagagaagaaagaagacgaacttccgttcaaccgtaaccttctgcgtaaggttgacgag
cttgagctgtcggtacgttcggctaactgcctgaagaacgacaacatcatctatatcggt
gatcttgttcagaagaccgaagcagaaatgctccgtacgccgaacttcggccgtaagtcg
ctgaacgaaatcaaggatgttctggctcagatgggtctgcatcttggtatggaagtcggc
ggttggccgccggaaaacatcgaagaacttgctcgcaagttcgaagatccgttctaa
DBGET
integrated database retrieval system
