Thalassospira indica: DY252_09465
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Entry
DY252_09465 CDS
T05581
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tii03016
]
DY252_09465 (rnd)
Enzymes [BR:
tii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DY252_09465 (rnd)
Transfer RNA biogenesis [BR:
tii03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DY252_09465 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXO14424
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All DBs
Position
1985028..1986191
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AA seq
387 aa
AA seq
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MEPITTTEELRDLCERLRKFEYVTVDTEFMRDSTYWPQLCLVQLASPEPSDNGAAVDPLA
EGIDLAPLFELMQDEAVVKVFHAARQDIEIFVHLSGKVPHPVFDTQVAAMVLGYGDQVGY
ETLVNKVARKNIDKSMRFTDWSRRPLSTKQISYALSDVTHLRVIYEAFHERLEANGRAVW
LFEEMERLTDPSIYSIEPADAWKRLKTRSNSPKFLAVTRALGEWRENEAQRKNLPRNRVL
RDDTLLDIAARQPMTDKDLDKTRGVGRNFGSSKPGQAIIEAIKAALDSPQDQWPKPKERI
ELPAGIGPTVELLKVLLKLCAEEKGVAQRLVASSDDLQNIAADDNADVPAMRGWRRELFG
QYALRLKHGQLGLKLKDGEVVFVELDK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaattacaactacagaagaacttcgcgatctctgtgaaagattgcgcaagttc
gaatatgtcactgtcgataccgaattcatgcgggactcgacctattggccgcaactgtgt
ctggtgcagctggcaagtccggagccgtccgataacggggctgcggtcgatccgctggcg
gagggcattgatcttgcgccgctgttcgagctgatgcaggacgaggcggtggtcaaggtg
tttcacgccgcccgtcaggatatcgagattttcgtccatctgtcgggcaaggtcccgcat
ccggtgtttgatacccaggtggcggcgatggtgctgggctatggcgatcaggtcggctat
gagacgctggtcaacaaggtggcgcgcaaaaacatcgataagtcgatgcgctttaccgat
tggtcgcgccgtccgctttcgaccaaacagatcagttacgcattgtcggatgtgacacac
ttacgcgtgatctatgaagcgtttcatgagcgccttgaggccaatggccgtgctgtctgg
ctgtttgaggaaatggaacgcctgaccgatccgtcgatctattcgattgagccggccgat
gcttggaagcggcttaaaacccggtccaacagcccgaaattcctggccgtgacgcgcgcg
cttggcgaatggcgcgagaatgaggcgcagcgcaagaacctgccgcgcaaccgggttttg
cgcgatgataccttgcttgatatcgccgcccgtcagccaatgaccgacaaggaccttgat
aaaacgcgtggcgttggccggaactttggcagctccaaaccgggccaggcgatcatcgag
gcgatcaaggccgcacttgatagcccgcaggatcagtggccgaagccaaaggaacgcatc
gaactgccagccgggatcggcccgacggtggagcttctgaaagttctgcttaaactctgt
gccgaggaaaagggcgttgcccagcgtctggtggcctcaagcgacgatcttcagaacatc
gccgccgacgataacgcagacgttccggccatgcgtggctggcggcgcgagcttttcggg
caatatgcgctgcgcctgaaacacgggcagcttggccttaagcttaaagacggcgaagtg
gtgtttgtcgagcttgataaatag
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