Thalassospira indica: DY252_11415
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Entry
DY252_11415 CDS
T05581
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tii03021
]
DY252_11415 (rpoH)
Transcription machinery [BR:
tii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DY252_11415 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
TPD
Adaptin_binding
Motif
Other DBs
NCBI-ProteinID:
AXO14751
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All DBs
Position
complement(2389796..2390662)
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AA seq
288 aa
AA seq
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MKQGNALPTISQDGLTVYLQRIRRYPMLTPEQETTYACNFRDKDCDKSAEKLITSHLRLV
AKIAMSYRGYGLPINELISEGNVGLLQSVKRFDPDKGFRLATYAMWWIRAAIQEYILHSW
SLVKMGTTAAQKKLFFNLRKLKSQMQAIDEGDLQPEQVELIATKLNVSEDDVVMMNRRLA
GPDHSLNAPVRIEGDGEWVDWIESDDEDQETLYGKREEFLQRMSMLKNAMSHLNDRERDI
LTQRRLLESPVTLENLSLAYGISRERIRQIEVRAFEKVRKSIHTDLPH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggaaacgctcttccaactatctctcaagatggtctcacggtataccttcaa
cgtatacgccgctacccgatgcttaccccggaacaggaaacgacctatgcctgcaatttc
cgggacaaggattgcgataaatctgctgaaaaactgattaccagccacttgcgcctggtc
gccaagatcgcgatgagttaccgcggttatggcctgccgatcaatgaactcatttccgag
ggcaatgtcggcctgctgcagtcggtaaaacgcttcgacccggacaagggcttccgcctt
gcgacatatgcaatgtggtggatccgcgccgccatccaggaatacatcctgcattcatgg
tcgcttgtgaaaatgggtacgactgcggcacagaaaaagctgttcttcaacctgcgcaaa
ctcaaaagccagatgcaggcaatcgatgaaggcgaccttcaacctgaacaggtcgaactg
atcgcaaccaaactcaatgtgtccgaagatgacgttgtgatgatgaaccgccgcctggcc
ggtccggatcactcactgaacgcgccggtccgtattgagggtgacggtgaatgggtcgac
tggatcgaaagcgatgacgaagatcaggaaaccctttatggcaagcgtgaagaattcctg
cagcgcatgagcatgctcaaaaacgcgatgtcgcatctcaatgatcgtgaacgcgatatt
ctgacgcagcgccgcctgcttgaaagcccggtcacccttgaaaacctgagccttgcctat
ggcatctcacgcgagcgcatccgtcagatcgaagtacgcgcctttgaaaaggtccgcaaa
tcgatccatacggacctgccccactga
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