Thalassospira indica: DY252_11670
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Entry
DY252_11670 CDS
T05581
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tii
Thalassospira indica
Pathway
tii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DY252_11670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tii02000
]
DY252_11670
Transporters [BR:
tii02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DY252_11670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
UBA_2
HicB-like_2
Motif
Other DBs
NCBI-ProteinID:
AXO14798
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All DBs
Position
2446765..2447880
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AA seq
371 aa
AA seq
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MQLIKTLTASTALLVVASGSAFAQEMVNDMTLVSWGGAYQNSQVKAYAEPYMEMHPEVSI
TWDESSNEAVAKMRAMNEANNMTWDLVDVVAADAMRLCDEGLAMEIDPNEILAAAPDGTS
AEDDFGDLLVSDCYIPQIVYSTTFGYREDMVPDGTPAPTDICALFDTETYPGMRSLEKRP
INNMEWALLCDGVAKDEVYDVLETPEGQQRALDKLATIKDSVIWWSAGADTPQLLADGEV
FMGSTYNGRLFSAIVEQNQPIAMLWDAQVFDLDGWIIPAGLPEERLNRVLDFVKFATDTQ
RLADQAAYISYGPARLSSAPLVGKHAELGVDMAPHMPTDPANAKNTFLYNYEFWADYRDD
IDAKFQAWLAQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttattaaaacccttactgcatcaacagctttgctcgttgtcgcaagtggttcc
gcatttgcccaggagatggtaaatgacatgacccttgtcagctggggtggtgcataccag
aacagccaggtcaaggcttatgcagagccttacatggaaatgcatccagaggtttcaatt
acctgggatgaaagttcgaacgaggctgtcgcaaaaatgcgtgcaatgaacgaagccaat
aacatgacctgggatctggttgacgttgttgctgccgatgctatgcgcctttgcgatgaa
ggtctcgcaatggaaattgacccgaacgaaatccttgcagcagcgccggacggtacctct
gccgaggatgactttggtgatctcctcgtaagtgactgctacattccgcagatcgtttat
tcgaccacgtttggttaccgcgaagacatggttccggatggaacaccggcaccgaccgac
atctgtgccctgttcgataccgaaacctatccgggcatgcgttcgcttgaaaaacgcccg
atcaacaacatggaatgggctctgctctgcgatggtgttgccaaggacgaagtctacgac
gttcttgaaacgccggaaggtcagcagcgcgcgctcgacaaactggcaaccatcaaggac
agcgtgatctggtggagtgccggtgcagataccccgcaacttctggctgatggtgaagtc
ttcatgggctcgacctacaatggtcgtctgttctcggcaattgttgagcagaatcagccg
atcgccatgctttgggatgcacaggtctttgaccttgacggttggatcattccggccggt
cttccggaagaacgtctgaaccgcgttctggactttgtgaagtttgcaaccgatacccag
cgccttgctgatcaggctgcttacatttcgtatggtccggctcgtttgtcgtcggcgccg
cttgttggcaaacacgccgaactgggcgttgacatggcaccgcacatgccgaccgacccg
gcaaacgccaagaacacgttcctctataactatgagttctgggctgactatcgtgacgac
atcgatgccaagttccaggcttggctcgctcaataa
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