Thalassospira indica: DY252_12170
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Entry
DY252_12170 CDS
T05581
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tii
Thalassospira indica
Pathway
tii00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DY252_12170
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tii01007
]
DY252_12170
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tii03016
]
DY252_12170
Enzymes [BR:
tii01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DY252_12170
Amino acid related enzymes [BR:
tii01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DY252_12170
Transfer RNA biogenesis [BR:
tii03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DY252_12170
Prokaryotic type
DY252_12170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
AXO14884
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Position
2547326..2548600
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AA seq
424 aa
AA seq
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MHDIKWIRDNPEAFDAAMTARKQDVTAQRLIDIDVERRKLMTEHQEMLARRKTISGEIGK
LRKNGENADDLMAEMGTLKDKIKEAEDGQASLNDQLDLLLSSFPNILDPEVPVGEDENDN
VEVNRWGTPGEFDFQPLEHFEIGEKLGMMDFETAAKLSGSRFVILRGGLAKLERALAQFM
LDLHTGEHGYQETITPMLVRDDAMFGTGQLPKFAEDSFKTTNDYWLIPTSEVTLTNQVAG
DIIDQAKLPLRYTALTQCFRSEAGSAGRDTRGMIRQHQFSKVEMVSVVEAEKSDEELTRK
TRCAETVLERLGLPYRTVILCTGDIGFSAAKTYDIEVWLPGQGKYREISSCSNTRDFQAR
RMNARYRTTGDKKTQFVHTLNGSGLAVGRCLISVMENYQQADGSIRVPDALKPYMGGLEV
ISAG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacattaaatggattcgggacaatcccgaggcttttgacgcagcaatgactgcg
cgcaaacaggacgttaccgcacagcgtctgatcgatatcgacgttgaacgccgcaaactg
atgactgaacatcaggaaatgcttgcccgccgcaagacgatctcaggtgaaatcggcaaa
ttgcgcaagaatggcgagaatgccgacgacctgatggccgaaatgggcacgctcaaggac
aagatcaaggaagccgaagacggtcaggcatccctgaacgaccagcttgatcttttgctg
tcgtctttcccgaacattcttgatcccgaagtcccggttggcgaagacgaaaacgacaat
gtcgaagtcaatcgttggggcacgccgggtgagtttgatttccagccgctcgaacatttc
gagatcggcgagaaacttggcatgatggatttcgaaaccgcagccaaactgtctggttcg
cggttcgtcattctgcgtggcggtttggccaagcttgaacgtgcgcttgcacagttcatg
ctggatctgcacacaggcgaacatggttaccaggaaaccatcacgccgatgctggtccgc
gatgatgccatgtttggtaccggccagttgccgaaatttgccgaggattcgtttaaaacc
accaatgattactggctgatcccgacgtcagaagtgaccctgaccaaccaggttgccggt
gatatcattgatcaggcaaaactgccgctgcgctatacggcactgacccagtgcttccgt
tctgaagccggttcggcagggcgcgatacgcgcggcatgatccgccagcaccagttttca
aaggtggaaatggtttcggtggtcgaagcagagaaatctgacgaggaactgacccgcaag
acgcgctgtgcggagacggttctggaacgtcttggcctgccgtatcgcacggttattctg
tgcacaggcgatatcgggttctcggcggcaaaaacctatgacatcgaagtctggttgccg
gggcagggcaagtatcgcgaaatctcgtcatgctcgaacacgcgtgatttccaggcgcgt
cgcatgaatgcacggtatcgtactaccggtgacaaaaagacccagtttgttcataccctg
aacgggtctggccttgccgttggtcgttgcctgatttccgtgatggaaaactatcagcag
gcggatggctcgatccgtgttcctgatgcgctcaaaccttatatgggcgggttagaggta
atctcggcgggctag
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