Thalassospira indica: DY252_12305
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Entry
DY252_12305 CDS
T05581
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tii03021
]
DY252_12305 (rpoH)
Transcription machinery [BR:
tii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DY252_12305 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
GntR
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AXO14909
LinkDB
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Position
2576875..2577744
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AA seq
289 aa
AA seq
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MSAIKLPAVSQEEGFSGYLREVWKFPMLTADEEYMLAHRYQDHDDTEAAHKLVTSHLRLV
AKIAFGYRGYGLPMADLVAEGNTGLMRAVQKFDPERGFRLSTYAMWWIRAAVTEYILQSW
SMVKLGTMAAQKKLFFSLRKAKRQLNIYDNGELSPEEADQVAEKLGVTGREALEMNRRLA
ARDFSLNTPMPKDEGMEYLDTLSSDAPSPEALVADAEERVLHNGMLKNALGELPEREQEI
IKARFLSDDPITLEKLGERFGVSRERVRQLEARAFKKIQESVLTQHSAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattaaattacctgctgtttcccaggaagagggtttctcgggctatctccgt
gaagtctggaaattcccgatgcttacggcggacgaagaatacatgctggcccaccgttat
caggaccatgatgacaccgaggccgcccacaaacttgttaccagtcacttgcgccttgtt
gccaagatcgcgtttggttatcgcggctatggcctgccgatggcagaccttgtcgcagag
ggcaataccggcctgatgcgtgcggtacagaagttcgatccggaacgtggtttccgcctg
tcgacctatgcgatgtggtggatccgtgctgcggtgactgaatacatcctgcaaagctgg
tcgatggtcaaactcggcaccatggcagcgcagaagaaactgttcttcagcctgcgtaaa
gccaagcgtcagcttaacatttatgacaatggtgaactttcgccagaggaagctgatcag
gttgctgaaaaacttggtgtgaccggccgtgaagcgcttgaaatgaaccgccgtcttgcg
gcgcgcgatttctcgctcaacacgccgatgccgaaagacgaggggatggaatatcttgat
accctgtcgtctgacgcaccaagcccggaagcactggttgctgatgccgaagaacgtgtt
cttcataacggcatgctgaagaacgcacttggcgaattgcctgaacgtgaacaggaaatc
atcaaggcccgtttcctcagcgatgatccgatcacgctggaaaagcttggtgaacgtttt
ggcgtcagccgtgagcgcgtccgtcagcttgaagcacgcgcgttcaagaaaattcaggaa
agcgtcctgacgcagcattcagcggcgtaa
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