Thalassospira indica: DY252_14835
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Entry
DY252_14835 CDS
T05581
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tii
Thalassospira indica
Pathway
tii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DY252_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tii03000
]
DY252_14835
03400 DNA repair and recombination proteins [BR:
tii03400
]
DY252_14835
Enzymes [BR:
tii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DY252_14835
Transcription factors [BR:
tii03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DY252_14835
DNA repair and recombination proteins [BR:
tii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DY252_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_Tnp_ISL3
HTH_23
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AXO15354
LinkDB
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Position
complement(3102553..3104040)
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AA seq
495 aa
AA seq
DB search
MEQLNNDICYQALKTRDRRFDGRFYTAVRTTGIFCRPICPAVTPKRDNVEFYPSAEAAIA
HGFRPCLRCRPEAAPGSPASAGVHATVARAVRLIDQGVLENGSITDLADRLGVGDRHLRR
IFKEHTGVTPQEHAKARRLLRARQLIVDSNLTMTEIADIAGFGSLRRFNDAMKQAYGQAP
TAFRRGVKTLSPEKPGSDDPFAARNDDLILRLRARQPFDADYLLAFFRARAIPGLETVRE
RTYARGFKIDGKLGLMICHFSADQAGVDVILRGPAREAVLEIGARVRRLFDLDADVPSIT
AQFSDDALLAPLVQKRPGLRVPGCWERFELALRAVLGQQVSVAAARTLAGRLVARFGDAL
PDDLIAGTGITHVFPTPQSLIGQELIPIGLTTRRAQTLADVIDLFARSDCDQMSGEGLIA
AMTAIKGIGPWTLNYFGLRGLGDPDAFPAADLGILKASGMGGGPDKVKALESISENWRPW
RAYAAQYLWSALEGE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctcaataacgatatttgctatcaggcactcaaaacccgggaccgtcggttt
gacgggcggttttataccgcggttcggaccaccgggattttctgtcgcccgatttgcccg
gcggtcacgcccaagcgcgacaatgtggaattctatcccagtgccgaggccgcaattgcc
catggttttcgcccatgcctgcgctgccgccccgaagccgcgccgggcagcccggcaagt
gccggtgtgcatgccacggtcgcccgtgcggtgcgcctgattgatcagggcgtgcttgaa
aatggctcgatcaccgatctggccgaccggcttggtgtcggggaccggcatttgcggcgc
atcttcaaggaacataccggtgtcacgccgcaagaacacgccaaagcacgccgtctgttg
cgggcgcggcagttgattgtcgatagcaacctgaccatgaccgaaatcgccgatatcgcc
ggttttggcagtttgcggcgtttcaacgatgcgatgaaacaggcctatgggcaggcaccg
acggcctttcggcgcggtgtcaaaactctgagcccggaaaagccggggtcggatgatccg
tttgctgcgcgcaatgatgatttgattttacgtctgcgtgcccgccaaccctttgatgcc
gactatcttctggccttcttccgcgcacgtgccattccgggcttggaaaccgtccgtgaa
cgcacctatgcgcgcggtttcaaaattgatggcaagctcggattgatgatctgtcatttc
agcgccgaccaagccggcgtggatgtcatcctccgtggcccggcccgcgaggcggtgctt
gaaatcggcgcaagggtgcgcaggctttttgatcttgatgccgatgtgccgtccatcacc
gcacagttttccgacgatgccttgctggcacccttggtacaaaaacgccccggccttcgc
gtgcccggatgctgggagcggtttgaactggcccttcgggctgttttgggccaacaggtt
tcggtggcggcggcacgtaccttggccgggcggcttgtggcccggtttggcgatgccttg
cccgatgatctgattgcggggacggggatcacgcatgtttttccgacaccgcaaagtctg
atcggacaggaactgatcccgattgggctgaccacgcgacgggcgcagacccttgccgat
gtgattgatctgtttgccagatcagattgtgatcagatgtctggtgaggggctgattgct
gccatgacggcgatcaagggcattggcccttggacattgaactactttggtctgcgcggg
cttggtgacccggatgctttcccggccgctgatcttggcatccttaaggcatctggcatg
ggcggcggcccggacaaggtgaaggcactggaaagcatttcggaaaactggcggccatgg
cgggcatatgccgcgcaatatctttggtccgcattggaaggagaatga
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