Thalassospira indica: DY252_15545
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Entry
DY252_15545 CDS
T05581
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tii
Thalassospira indica
Pathway
tii00521
Streptomycin biosynthesis
tii00523
Polyketide sugar unit biosynthesis
tii00525
Acarbose and validamycin biosynthesis
tii00541
Biosynthesis of various nucleotide sugars
tii01100
Metabolic pathways
tii01110
Biosynthesis of secondary metabolites
tii01250
Biosynthesis of nucleotide sugars
Module
tii_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DY252_15545 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DY252_15545 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DY252_15545 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DY252_15545 (rfbB)
00525 Acarbose and validamycin biosynthesis
DY252_15545 (rfbB)
Enzymes [BR:
tii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DY252_15545 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AXO15477
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Position
complement(3261141..3262211)
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AA seq
356 aa
AA seq
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MKVIVTGGAGFIGSAVCRLMTGLKGYEVLNIDKLTYAGDLRTLASISARDNYHFAHQDIC
NRDAIVKIFDDFQPDAVMHLAAESHVDRSIDGPADFIQTNVVGTFNLLDVARAYFDKLPA
DKRSQFRFHHISTDEVYGSLGSEGLFTEETAYAPTSPYSASKASSDHLVQAWHHTYGLPI
VISNCSNNYGPYQFPEKLIPLMALNLLHGKKLPVYGEGLNTRDWLHVEDHAEALVKILTE
GRIGEKYNVGGCNELTNIDVVKRIFDTVQEIVPDISFENFDEAVTYVKDRPGHDWRYAID
PTKMQNELGWKPKYDFETGLRQTIEWYVNNREWWEPILKSKYAGERLGSAKGQADA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcgtgacgggcggtgcaggttttatcgggtctgctgtttgtcggctgatg
accgggttgaagggctatgaagtccttaatatcgataaactgacctatgcgggtgacctg
cggacgttggcgtcgatttctgcacgcgataactaccattttgcccatcaggatatctgc
aaccgggacgccatagttaaaatttttgatgactttcagcccgatgcggtgatgcatctg
gcggcggaaagtcatgttgatcgttcgatcgacggaccggctgattttattcagaccaat
gtggttggtacgtttaacttgcttgacgttgcgcgtgcgtatttcgataagctgccggcg
gataaacgttcacaatttcgattccaccatatctcgacggatgaggtttatggttcgctt
ggcagcgaagggctgttcaccgaagagaccgcgtatgccccgacctcaccttattctgcc
agcaaggcgagttcggatcatctggtgcaggcttggcaccatacttatggattgcctatt
gtcatcagtaattgttccaacaattacggtccctatcagttcccggaaaaactcattcca
ctgatggcgctcaacctgctgcatggcaagaagcttcctgtctacggcgagggtttgaat
acacgcgactggctgcatgttgaggatcatgcagaggcactggtcaagatcctgaccgag
ggccgcattggcgagaaatacaatgttggcggttgtaacgagctgaccaacatcgacgtc
gtcaaacgcatatttgatacggtgcaagagatcgtgcccgacatctcgttcgagaatttt
gatgaagcggttacgtacgttaaagaccgccccggccacgattggcgctatgccatcgat
ccaaccaaaatgcagaatgagttgggttggaagccgaaatacgatttcgaaaccggcctt
cggcaaaccattgagtggtatgtgaataatcgcgaatggtgggagccgattttaaaaagt
aaatatgcaggcgaacgtctgggaagtgccaaggggcaggccgatgcctaa
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