Thalassospira indica: DY252_20820
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Entry
DY252_20820 CDS
T05581
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K19595
membrane fusion protein, gold/copper resistance efflux system
Organism
tii
Thalassospira indica
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tii02000
]
DY252_20820
01504 Antimicrobial resistance genes [BR:
tii01504
]
DY252_20820
Transporters [BR:
tii02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DY252_20820
Antimicrobial resistance genes [BR:
tii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
DY252_20820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
Beta-barrel_RND
RND-MFP_C
HH_EMRA
Beta-barrel_RND_2
Biotin_lipoyl
BSH_CusB
HH_AAEA_pHBA
HH_YBHG
BSH_CzcB
YknX_C
Motif
Other DBs
NCBI-ProteinID:
AXO16404
UniProt:
A0ABM6Y588
LinkDB
All DBs
Position
complement(4420238..4421392)
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AA seq
384 aa
AA seq
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MSLVSSTSASEAEAQPAQMPVPQVPVAEVIIRQVAASTEFTGHLEAMKTIELRSRVGGAI
DTVSVPEGGMVQPGDLLFQIDPRPFEVALNAAKAQLQQANVLLEQAETDFRRTESLSPNG
TVSRKTLDDAQALLGQRQAQVEIAKAAVAAAELDLSYTRVTAPIAGRVDRVLVTEGNLVA
GGNAGAATLLTTIVSVDPLYVYFDIDEATYLGFVGNARAPETGKVAEKLVVQLGLMTDTG
FPHTGQLDFLGNRVDRSTGTIRARAIVRNSDGRLTPGLFARVKLVTAQPAQTVLIDDQAI
GIDQGRRYVLALGPENKAEYRPVEIGPMVDGLRVVSKGLTPTDKIIIKGLVRPGMQVVPQ
MVSMLPGQAADGERASGQAQEARR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtctcttcgacatcggcatcggaagctgaggcacagccggcgcagatgccc
gtcccgcaagttcccgtggctgaagtcatcattcgccaagttgcggcttctacggaattc
actggccatctcgaagcgatgaagaccatcgaactgcgttcgcgtgttggcggtgcaatc
gataccgtgagtgtccccgaaggcggtatggtgcaacctggagaccttctcttccagata
gatcccagacctttcgaggttgcattgaatgcagcaaaggctcagttgcagcaggccaat
gtcctgcttgaacaagccgagaccgacttcaggcgtacagaatcgctgtctcccaatggt
acggtatcacgcaaaacactcgatgacgcgcaagcgctgctcggtcagcgccaagcccag
gtagagattgccaaggcggctgtcgcggctgccgagctcgacctttcctacacaagggtc
actgccccaattgccggacgcgttgaccgggttcttgtcacggaaggcaatcttgttgca
ggcggcaatgccggtgcggctacgttgctcaccacgatcgtctcggtcgatccactctat
gtttatttcgatattgacgaggccacctatctcggcttcgtcggtaatgcgcgcgcgccc
gaaacgggcaaggtcgcggaaaagcttgttgtccagctcggtctgatgaccgatacaggc
tttccgcataccggccaactcgacttccttggcaatcgtgtcgaccggagtacgggcacg
atccgcgcccgggccatcgtcaggaattccgacggcaggctgactcccggcctcttcgca
cgggtcaaactcgttaccgcgcaaccggctcaaaccgttcttatcgacgatcaggcgatc
ggcatcgatcagggacggcgctacgtcctggcgcttggccccgagaacaaggcggaatac
cgccccgtcgaaatcggacctatggtcgacggactgcgcgtcgtctccaaaggtctcact
ccgactgacaagatcatcataaagggccttgtgcgccccggtatgcaggttgtcccgcag
atggtctcaatgcttccagggcaggctgctgacggcgagcgggcctccgggcaagcgcag
gaggcgcgtcgatga
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