Tuwongella immobilis: GMBLW1_00290
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Entry
GMBLW1_00290 CDS
T06428
Name
(GenBank) ribonuclease iii : Ribonuclease 3 OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=rnc PE=3 SV=1: Ribonucleas_3_3: dsrm
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GMBLW1_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tim03019
]
GMBLW1_00290
03009 Ribosome biogenesis [BR:
tim03009
]
GMBLW1_00290
03036 Chromosome and associated proteins [BR:
tim03036
]
GMBLW1_00290
Enzymes [BR:
tim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GMBLW1_00290
Messenger RNA biogenesis [BR:
tim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GMBLW1_00290
Ribosome biogenesis [BR:
tim03009
]
Eukaryotic type
90S particles
RNase
GMBLW1_00290
Prokaryotic type
rRNA processing factors
GMBLW1_00290
Chromosome and associated proteins [BR:
tim03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GMBLW1_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
VTS05229
UniProt:
A0A6C2YRE7
LinkDB
All DBs
Position
1:complement(4307600..4308331)
Genome browser
AA seq
243 aa
AA seq
DB search
MPSKPVTNQPERDVLAECQQRIGYTFQRPQLLLYALTHSSGANSRQCSNERLEFLGDSVL
GLITCEQVFLRFPDFQEGEMTDVKSAVVSRAACARFSEQLGLGSFLIVGKGMQLRNDVPE
NMLADVFESLVAAIYLDAGLDVARTFLLQFIGPEIDRVVANLNGANAKSMLQQLGQKQFG
TTPRYLLLDEQGPDHNKCFKVAAEMNRKCYPAAWGRNKKEAEVKAAVNALAFINGQEIPY
PSD
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgaaacctgtcaccaaccaacccgaacgcgatgtcttggcggagtgtcagcag
cggattggctacactttccaacggccgcaattgcttctgtatgcgctgacgcattcctcg
ggtgcgaacagtcggcaatgttccaacgaacgcttggaatttttgggcgactcggtgttg
gggctgatcacctgcgagcaggtctttcttcgattcccggactttcaagaaggcgaaatg
accgatgtcaagtcggcggtggtgagccgcgcggcgtgtgcccgattcagcgagcaactt
gggctggggtcattcctgattgtcggcaaggggatgcagcttcgcaatgatgttcctgaa
aatatgcttgcggatgtttttgagtcgttggtggccgcgatttatttggatgccgggttg
gatgttgcgcggacatttttgttgcagttcatcgggccggaaatcgatcgggtcgtcgcc
aatctgaacggggcgaatgcgaagtcgatgctgcaacagcttggccagaaacagtttggg
acgacgccacgctatctgctgttggatgaacaggggccggatcacaacaagtgttttaag
gttgcggcggaaatgaaccgcaaatgctacccggccgcgtggggacggaataagaaagag
gcggaagtgaaggcggcggtgaatgcgttggcgttcatcaatggccaggagattccgtat
ccgtcggattga
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