Tuwongella immobilis: GMBLW1_02500
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Entry
GMBLW1_02500 CDS
T06428
Name
(GenBank) 5-hydroxymethyluracil dna glycosylase : Formamidopyrimidine-DNA glycosylase OS=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) GN=mutM PE=3 SV=1: Fapy_DNA_glyco: H2TH: zf-FPG_IleRS
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tim
Tuwongella immobilis
Pathway
tim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GMBLW1_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_02500
Enzymes [BR:
tim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GMBLW1_02500
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GMBLW1_02500
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GMBLW1_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7571
Motif
Other DBs
NCBI-ProteinID:
VTS04788
UniProt:
A0A6C2YQ01
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All DBs
Position
1:4017205..4018074
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AA seq
289 aa
AA seq
DB search
MPELPEVETVVRDLRPAVSQQRVTGIWVGPHSLRRIWQPEWSEQVAGDTILGLTRRGKWM
RMPMQRGGELLWHLGMTGQMTVHAISDPLADHLHLRMQWESGHELRFRDIRRFGSVDWFA
SSAQLDAFLAERLGPEPFDLTDSQLAAALQRTTRPIKAALLDQLIVAGVGNIYADEALFR
AHLPPQKPANQLTADEITQLRLAIVHVIEHAIDGRGSTIRNYVGGSGLEGSYQDEHQVYG
RTDQPCRNCATAIHCVRIAGRSSHYCPQCQPESLAVQAATAPAKRKRRG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcccgaagtggaaacggtcgtccgggatttgcggccagcagtgagtcag
cagcgggtgaccggcatctgggtcggcccccattcgttgcggcgcatttggcagcccgaa
tggagcgagcaggtcgccggggatacgatcctggggctgactcgtcgcggaaaatggatg
cgcatgcccatgcagcgcggcggcgagctgctttggcatctgggaatgaccggacaaatg
accgtgcatgcgatatccgatcccctggcagaccacctgcacttgcggatgcagtgggag
agtggccacgaactgcgcttccgagatatccgacgcttcggatcggtcgattggttcgcc
tcttctgcgcagttggatgcgttcctagccgaacgtctgggaccggaaccgttcgatctg
accgattcgcaactggcggccgccctgcagcgcacgactcgccccatcaaagcggcgctc
ttggatcaactgatcgtcgcgggggtgggaaatatctacgcggatgaggcgttgtttcga
gcgcaccttccgcctcagaagccggcgaatcagttgactgccgacgaaatcacgcaactt
cggctagcaattgtccacgtgattgaacatgcgattgacgggcgtggctcgacgattcgc
aattatgtcggtggttcgggtctggaaggtagttaccaggacgagcatcaagtctacgga
cgaacggatcagccgtgtcgcaactgtgccaccgcgattcattgcgttcgcattgctggc
cgatcgtcgcattattgtccacaatgtcagccggaatcgcttgcagtgcaagcggcgaca
gccccggccaaacggaagcgtcggggataa
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