Tuwongella immobilis: GMBLW1_02790
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Entry
GMBLW1_02790 CDS
T06428
Name
(GenBank) 2 -5 rna ligase : 2'-5' RNA ligase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3795 PE=4 SV=1: LigT_PEase: LigT_PEase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tim03016
]
GMBLW1_02790
Enzymes [BR:
tim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GMBLW1_02790
Transfer RNA biogenesis [BR:
tim03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GMBLW1_02790
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
VTS04730
UniProt:
A0A6C2YQS0
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All DBs
Position
1:complement(3968918..3969508)
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AA seq
196 aa
AA seq
DB search
MAKPMRTFIAVELSESLESQLTTLQQTLSRSIPGVKWVSRDNLHVTLLFLGDVDPRDTVM
ICRTVQRVGSELAPFTLTVEGLGCFPNLRRPRVLWAGLTTGAETLQRLHAEIEPAMLDLR
GYRREDRPYTPHVTLGRIDGEHDSEVIQNAISAKSTWHGGTCTINEILVMSSELTREGPI
YTPIGRAPLTGTPTDD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccgatgcgaaccttcatcgccgtggaattgtccgaatcgctagaatcgcag
ctaacgaccctgcaacagaccctgagtcgctcaattccgggcgtgaaatgggtgagccgc
gataatctgcatgtcacgctgctgtttctgggcgatgtcgatccacgggataccgtgatg
atctgtcgcactgtgcagcgagtcggcagcgaactggcgccattcacgctgaccgtcgag
gggttggggtgcttcccgaatctgcgtcggcctcgtgtgttatgggcgggcttgacgacc
ggcgcagagacgttacaacgactgcacgcggaaattgagccagccatgctcgacctacgg
ggctaccgtcgtgaagatcgcccttacaccccgcatgtgaccctgggccgaattgacggc
gagcacgattccgaggtgatacagaacgccatcagtgcgaaatcgacgtggcacggcggc
acctgcaccatcaacgaaatcctcgtgatgagcagcgaactcacccgagaaggcccgatt
tacacgcccatcggccgtgccccgctgaccggcacaccgaccgacgattga
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